FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005491265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005491265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72421
Sequences flagged as poor quality0
Sequence length301
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1160.16017453501056322No Hit
TTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1090.15050883031164994No Hit
TTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1080.14912801535466233No Hit
TAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1060.1463663854406871No Hit
TTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1050.14498557048369948No Hit
ACATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1020.14084312561273665No Hit
ATCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1020.14084312561273665No Hit
CTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1000.1380814956987614No Hit
TCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC990.1367006807417738No Hit
CTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC990.1367006807417738No Hit
ATATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC980.1353198657847862No Hit
CCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC970.13393905082779856No Hit
ACTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC960.13255823587081095No Hit
CCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC960.13255823587081095No Hit
ACCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC960.13255823587081095No Hit
TGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC950.13117742091382334No Hit
AGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC940.12979660595683573No Hit
ATAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC940.12979660595683573No Hit
ATCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC930.1284157909998481No Hit
TACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC930.1284157909998481No Hit
CCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC920.1270349760428605No Hit
CCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC920.1270349760428605No Hit
TCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC920.1270349760428605No Hit
TCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC920.1270349760428605No Hit
ATACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC910.12565416108587288No Hit
TTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC910.12565416108587288No Hit
TACCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.12427334612888526No Hit
TCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.12427334612888526No Hit
TTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.12427334612888526No Hit
TGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC890.12289253117189765No Hit
ACCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC890.12289253117189765No Hit
ACAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC880.12151171621491005No Hit
GTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC880.12151171621491005No Hit
CACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC880.12151171621491005No Hit
AATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC870.12013090125792243No Hit
TTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC870.12013090125792243No Hit
AAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC860.11875008630093482No Hit
CTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC860.11875008630093482No Hit
TAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC860.11875008630093482No Hit
TATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
CCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
TATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
CTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
TCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
ACACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
TAGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.1173692713439472No Hit
AAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.11598845638695959No Hit
CAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.11598845638695959No Hit
GTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC830.11460764142997197No Hit
TGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC830.11460764142997197No Hit
CATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.11322682647298436No Hit
ATTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.11322682647298436No Hit
CTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.11322682647298436No Hit
GTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.11322682647298436No Hit
GCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.11322682647298436No Hit
TCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.11184601151599674No Hit
AACCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.11184601151599674No Hit
TAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.11184601151599674No Hit
ACGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.11184601151599674No Hit
TCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.11184601151599674No Hit
AAGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC800.11046519655900913No Hit
GCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
TCGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
CTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
CGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
AACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
CCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
GTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.10908438160202151No Hit
TGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
TTCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
AGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
GTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
CTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
GAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
CAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
TACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
CTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.1077035666450339No Hit
CAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.10632275168804628No Hit
CCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.10632275168804628No Hit
ACTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.10632275168804628No Hit
GATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.10632275168804628No Hit
CACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.10632275168804628No Hit
GACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.10494193673105867No Hit
CGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.10494193673105867No Hit
GGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.10494193673105867No Hit
CAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.10494193673105867No Hit
TTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.10356112177407105No Hit
GCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.10356112177407105No Hit
TGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.10356112177407105No Hit
CCTGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.10356112177407105No Hit
GGTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
TTAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
ATTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
GGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
CATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
CCAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
AGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
TCTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
GGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.10218030681708344No Hit
CGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC730.10079949186009582No Hit
CGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC730.10079949186009582No Hit
TGTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC730.10079949186009582No Hit
AAGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC730.10079949186009582No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)