Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005491509 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 93887 |
Sequences flagged as poor quality | 0 |
Sequence length | 301 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGATCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
GCCCCCT | 35 | 0.0 | 295.0 | 1 |
AGATCCT | 45 | 0.0 | 295.0 | 1 |
ACGCCTC | 10 | 8.4526674E-4 | 295.0 | 1 |
ACGCCTA | 80 | 0.0 | 295.0 | 2 |
GCGACCT | 35 | 0.0 | 295.0 | 1 |
TTGTCCT | 50 | 0.0 | 295.0 | 1 |
ATAGCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
CGCGCCT | 20 | 6.1549144E-8 | 295.0 | 1 |
GCGCCTA | 70 | 0.0 | 295.0 | 2 |
GCGCCCT | 35 | 0.0 | 295.0 | 1 |
GTTACCT | 40 | 0.0 | 295.0 | 1 |
TTCCCTA | 170 | 0.0 | 295.0 | 2 |
TGACCTA | 170 | 0.0 | 295.0 | 2 |
TCGGAGG | 10 | 8.4526674E-4 | 295.0 | 7 |
CTCGGAG | 10 | 8.4526674E-4 | 295.0 | 6 |
CTGCCTA | 80 | 0.0 | 295.0 | 2 |
CCCCCTA | 145 | 0.0 | 295.0 | 2 |
TCGTCCT | 45 | 0.0 | 295.0 | 1 |
GGGCCTA | 95 | 0.0 | 295.0 | 2 |