Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005491529 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 78394 |
Sequences flagged as poor quality | 0 |
Sequence length | 301 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCACCTA | 95 | 0.0 | 295.00003 | 2 |
CGCCCTA | 95 | 0.0 | 295.00003 | 2 |
TGATCCT | 45 | 0.0 | 295.0 | 1 |
TCGCCCT | 35 | 0.0 | 295.0 | 1 |
ATCCTCG | 10 | 8.450007E-4 | 295.0 | 3 |
GTACCCT | 40 | 0.0 | 295.0 | 1 |
AGATCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
GGTCCTA | 125 | 0.0 | 295.0 | 2 |
TCGGGCG | 10 | 8.450007E-4 | 295.0 | 7 |
CGCGCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
GCGCCTA | 90 | 0.0 | 295.0 | 2 |
CCTACGA | 10 | 8.450007E-4 | 295.0 | 5 |
TCCTCGG | 20 | 6.148366E-8 | 295.0 | 4 |
GCGCCCT | 10 | 8.450007E-4 | 295.0 | 1 |
CGTTCCT | 50 | 0.0 | 295.0 | 1 |
GACCCCT | 25 | 5.275069E-10 | 295.0 | 1 |
GTAGCCT | 10 | 8.450007E-4 | 295.0 | 1 |
CTACGAG | 10 | 8.450007E-4 | 295.0 | 6 |
ACTACCT | 25 | 5.275069E-10 | 295.0 | 1 |
GGGCCTA | 50 | 0.0 | 295.0 | 2 |