FastQCFastQC Report
Wed 8 May 2024
EGAF00005491533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005491533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65916
Total Bases19.8 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1300.197220705139875No Hit
TTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1090.16536197584804901No Hit
TTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1060.1608107288063596No Hit
ATCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1060.1608107288063596No Hit
CTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1060.1608107288063596No Hit
TTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1040.1577765641119No Hit
TTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC1010.1532253170702106No Hit
CACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC980.14867407002852115No Hit
TTCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC950.1441228229868317No Hit
TCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC950.1441228229868317No Hit
CTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC940.1426057406396019No Hit
CTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC940.1426057406396019No Hit
CCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC940.1426057406396019No Hit
CCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC930.1410886582923721No Hit
ATACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC920.1395715759451423No Hit
ATATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC910.1380544935979125No Hit
CTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.1365374112506827No Hit
TCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.1365374112506827No Hit
GTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.1365374112506827No Hit
ACCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC900.1365374112506827No Hit
TTAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC890.1350203289034529No Hit
CAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC890.1350203289034529No Hit
GCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC880.1335032465562231No Hit
TACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC880.1335032465562231No Hit
ATAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC870.13198616420899328No Hit
TACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC870.13198616420899328No Hit
CTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC870.13198616420899328No Hit
AAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC860.13046908186176345No Hit
ATCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC860.13046908186176345No Hit
ACATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC860.13046908186176345No Hit
TTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
GCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
TCCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
AAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
AACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
CATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
TAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC850.12895199951453365No Hit
CAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.12743491716730385No Hit
TCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.12743491716730385No Hit
TTGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.12743491716730385No Hit
ACGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.12743491716730385No Hit
CACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC840.12743491716730385No Hit
AGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC830.12591783482007401No Hit
ACTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC830.12591783482007401No Hit
CTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC830.12591783482007401No Hit
ACACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC830.12591783482007401No Hit
TCGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.12440075247284423No Hit
TATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.12440075247284423No Hit
TGTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC820.12440075247284423No Hit
CAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.12288367012561442No Hit
AAAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.12288367012561442No Hit
CCCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.12288367012561442No Hit
TTGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC810.12288367012561442No Hit
TGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC800.1213665877783846No Hit
TAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC800.1213665877783846No Hit
AACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC800.1213665877783846No Hit
ATCGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC800.1213665877783846No Hit
TGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC800.1213665877783846No Hit
TCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
TCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
GCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
ATTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
AATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
GTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
CCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC790.1198495054311548No Hit
CATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.118332423083925No Hit
ACAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.118332423083925No Hit
CCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.118332423083925No Hit
GTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.118332423083925No Hit
ATGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC780.118332423083925No Hit
GGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.1168153407366952No Hit
TCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.1168153407366952No Hit
CGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC770.1168153407366952No Hit
ATTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.11529825838946539No Hit
TGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.11529825838946539No Hit
GTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.11529825838946539No Hit
TTCGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC760.11529825838946539No Hit
TCCGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
CTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
AATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
TCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
TCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
GGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
TAGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC750.11378117604223557No Hit
GTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.11226409369500577No Hit
AAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.11226409369500577No Hit
ACCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC740.11226409369500577No Hit
AACCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC730.11074701134777597No Hit
GACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC720.10922992900054614No Hit
TTTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC720.10922992900054614No Hit
CTGGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC720.10922992900054614No Hit
GACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC720.10922992900054614No Hit
GGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC720.10922992900054614No Hit
CAGGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC720.10922992900054614No Hit
GTGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
TAGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
GTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
TATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
CCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
TAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
ACTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
ACGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
TAAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC710.10771284665331633No Hit
AAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC700.10619576430608653No Hit
CCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC700.10619576430608653No Hit
GCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC700.10619576430608653No Hit
CGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC700.10619576430608653No Hit
AGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC690.10467868195885673No Hit
TGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC690.10467868195885673No Hit
GAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC690.10467868195885673No Hit
GGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC690.10467868195885673No Hit
TTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC690.10467868195885673No Hit
TACCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
CACCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
ACGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
AGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
CTTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
CCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
TAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
GCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC680.10316159961162692No Hit
CTAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
ATCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
CGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
GGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
CTCGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
CAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
TCTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
CCTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
GACGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC670.1016445172643971No Hit
CCGGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC660.1001274349171673No Hit
CGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC660.1001274349171673No Hit
AGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC660.1001274349171673No Hit
CCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC660.1001274349171673No Hit
TACGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC660.1001274349171673No Hit
GAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGTAAGCC660.1001274349171673No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)