FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005491709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005491709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108
Sequences flagged as poor quality0
Sequence length301
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTCGAAGGAGTCGCCAGCGATAACCGGAGTAGTTGAAATGGTAATAA21.8518518518518516No Hit
GACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTA10.9259259259259258No Hit
TTCGGTTAAATCCAAAACGGCAGAAGCCTGAATGAGCTTAATAGAGGCCA10.9259259259259258No Hit
TCATGGAAGCGATAAAACTCTGCAGGTTGGATACGCCAATCATTTTTATC10.9259259259259258No Hit
TCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGC10.9259259259259258No Hit
TTCGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC10.9259259259259258No Hit
AGTAAACATAGTGCCATGCTCAGGAACAAAGAAACGCGGCACAGAATGTT10.9259259259259258No Hit
GATGTAATGTCTAAAGGTAACAAACGTTCTGGCGCTCGCCCTGGTCGTCC10.9259259259259258No Hit
TTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGTT10.9259259259259258No Hit
CCGCATGGAAATGAAGACGGCCATTAGCTGTACCATACTCAGGCACACAA10.9259259259259258No Hit
AATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACT10.9259259259259258No Hit
GTGCCCTACGGGAGGCAGCAGAGGTAGCATCTTGAAAGAAATCCAGCTTG10.9259259259259258No Hit
GTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGC10.9259259259259258No Hit
ATCTCATTTTGTGCATATACCTGGTCTTTCGTATTCTGGCGTGAAGTCGC10.9259259259259258No Hit
TTGGAAAGATTGGTGTTTTCCATAATAGACGCAACGCGAGCAGTAGACTC10.9259259259259258No Hit
CCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGC10.9259259259259258No Hit
CGAGGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTCTACTCTTTCTC10.9259259259259258No Hit
TGTTCACCATAAACGTGACGATGAGGGACATAAAAAGTAAAAATGTCTAC10.9259259259259258No Hit
AAGCGAGGGTATCCTACAAAGTCCAGCGTACCATAAACGCAAGCCTCAAC10.9259259259259258No Hit
AAGGGGACGCAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTT10.9259259259259258No Hit
TTCACCATAAACGTGACGATGAGGGACATAAAAAGTAAAAATGTCTACAG10.9259259259259258No Hit
TTTACCTACGGGAGGCAGCAGTGATAAACCTTTAGCAATAAACCAAAGTT10.9259259259259258No Hit
CCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCC10.9259259259259258No Hit
TGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGC10.9259259259259258No Hit
ATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGC10.9259259259259258No Hit
TTTTCCCAGCCTCAATCTCATCTCTCTTTTTGCGTTCTGCTTCAATATCT10.9259259259259258No Hit
AGGCCACAACCAACCAGAACGTGAAAAAGCGTCCTGCGTGTAGCGAACTG10.9259259259259258No Hit
TGTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCGAGCC10.9259259259259258No Hit
TTGGGATTATCATAAAACGCCTCTAATCGGTCGTCAGCCAACGTGAGAGT10.9259259259259258No Hit
CATGATGTTCTTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAA10.9259259259259258No Hit
ATTATACTCATCGCGAATATCCTTAAGAGGGCGTTCAGCAGCCAGCTTGC10.9259259259259258No Hit
CTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGTTCTCACTTCTGTT10.9259259259259258No Hit
TTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAG10.9259259259259258No Hit
GACGCGACGCGAGCAGTAGACTCCTTCTGTTGATAAGCAAGCATCTCATT10.9259259259259258No Hit
TGTTATTAATATCAAGTTGGGGGAGCACATTGTAGCATTGTGCCAATTCA10.9259259259259258No Hit
AGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATG10.9259259259259258No Hit
GAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTT10.9259259259259258No Hit
GAGCTTAATAGAGGCCAAAGCGGTCTGGAAACGTACGGATTGTTCAGTAA10.9259259259259258No Hit
TTTAGCCACCTAGAAACCAACAGCCATATAACTGGTAGCTTTAAGCGGCT10.9259259259259258No Hit
GTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCG10.9259259259259258No Hit
AAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGG10.9259259259259258No Hit
GAGAGCGGTCAGTAGCAATCCAAACTTTGTTACTCGTCAGAAAATCGAAA10.9259259259259258No Hit
GCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAAC10.9259259259259258No Hit
AGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGT10.9259259259259258No Hit
GGCGGCAAGTTGCCATACAAAACAGGGTCGCCAGCAATATCGGTATAAGT10.9259259259259258No Hit
CCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTAT10.9259259259259258No Hit
ATCAGCTTTACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCCACAGCTT10.9259259259259258No Hit
TATGCGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCC10.9259259259259258No Hit
GCTTCCTACGGGAGGCAGCAGTAGGGAATTTTCGGCAATGGGCGAAAGCC10.9259259259259258No Hit
TATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCG10.9259259259259258No Hit
TTATTATGTTCATCCCGTCACCATTCAAACGGCCTGTCTCATCATGGAAG10.9259259259259258No Hit
TTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGT10.9259259259259258No Hit
GTATGTTGACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAGTTTGTAT10.9259259259259258No Hit
CTCACCTACGGGAGGCAGCAATGATAAACCTTTAGCAATAAACGAAAGTT10.9259259259259258No Hit
TCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACA10.9259259259259258No Hit
TGAATATTAGACATAATTTATCCTCAAGTAAGGGGCCGAAGCCCCTGCAA10.9259259259259258No Hit
AACAAAGAAACGCGGCACAGAATGTTTATAGGTCTGTTGAACACGACCAG10.9259259259259258No Hit
TCGGCAGCAAGAACCATACGACCAATATCACGAAAATAGTCACGCAAAGC10.9259259259259258No Hit
AATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAA10.9259259259259258No Hit
CATGGGTGATGCTGGTATTACATCTGCCATTCAAGGCTCTAATGTTCCTA10.9259259259259258No Hit
TTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAACGGTGAGCCGCT10.9259259259259258No Hit
AATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGA10.9259259259259258No Hit
AGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTA10.9259259259259258No Hit
TTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTT10.9259259259259258No Hit
ATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAAC10.9259259259259258No Hit
AGTGAGAACCAGCTTATCAGCAAAAAAGTTTGAATTATGGCGAGAAATAA10.9259259259259258No Hit
AACGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAA10.9259259259259258No Hit
GATAGTTTGACGGTTAATGCTGGTAATGGTGGTTTTCTTCATTGCATTCA10.9259259259259258No Hit
TACTGTAGGCATGGGTGCTGCTGGTATTAAATCTGCCATTCAAGGCTCTA10.9259259259259258No Hit
CGCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTC10.9259259259259258No Hit
AACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCC10.9259259259259258No Hit
CCTTTACCAGCTTTAGCCATAGCACCAGAAACAAAACTAGGGACGGCCTC10.9259259259259258No Hit
GCGATAAACGGTCACATTAAATTTAACCTGACTATTCCACTGCAACAACT10.9259259259259258No Hit
TTGATATTAATAACACTATAGACCACCGCCCCGAAGGGGACGAAAAATGG10.9259259259259258No Hit
ATTACCTACGGGAGGCAGCAGGGGTTAGGTATGACCTTGCTCCCAACCAA10.9259259259259258No Hit
GTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTT10.9259259259259258No Hit
TTGCGAGGTACTACAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGG10.9259259259259258No Hit
GGTATAATAACCACCATCATGGCGACCATCCAAAGGATAAACATCATAGG10.9259259259259258No Hit
TTCTGACGTTCGTGATGAGTTTGTATCTGTTACTGAGAAGTTAATGGATG10.9259259259259258No Hit
TCTCTTCCAAGAGCTTGATGCGGTTATCCATCTGCTTATGGAAGCCAAGC10.9259259259259258No Hit
TGAGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCC10.9259259259259258No Hit
CCGAAGTTGCGGCTCATTCTGATTCTGAACAGCTTCTTGGGAAGTAGCGA10.9259259259259258No Hit
GTCACCTACGGGAGGCAGCAGGGGTTAGGTATGACCTTGCTCCCAACCAA10.9259259259259258No Hit
CCGCTTCGGCGTTATAACCTCACACTCAATCTTTTATCACGAAGTCATGA10.9259259259259258No Hit
CAACAGGCCACAACCAACCAGAACGTGAAAACGCGTCCTGCGTGTAGCGA10.9259259259259258No Hit
TAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGT10.9259259259259258No Hit
TGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGG10.9259259259259258No Hit
AAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAAT10.9259259259259258No Hit
TAAACCTACTGGGCACCAACTGACGCTGAGGCTCGAAAGTGTGGGTAGCA10.9259259259259258No Hit
CAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTCA10.9259259259259258No Hit
CTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACCGCATCAAG10.9259259259259258No Hit
TTGCATTCAGATGGATACATCTGTCAACGCCGCTAATCAGGTTGTTTCTG10.9259259259259258No Hit
CATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTC10.9259259259259258No Hit
TCTCATCATGGAAGGCGCTGCATTTACGGAAAACATTATTAATGGCGTCG10.9259259259259258No Hit
GGCTTTTTGACCGCCTCCAAACAATTTAGACATGGCGCCACCAGCAAGAG10.9259259259259258No Hit
TGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTGTCCACG10.9259259259259258No Hit
ATTTGTTATTGTGAGCATTTTCATCCCGAAGTTGCGGCTCATTCTGATTC10.9259259259259258No Hit
CTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGAC10.9259259259259258No Hit
CACCGCATGGAAATGAAGACGGCCATTAGCTGTACCATACTCAGGCACAC10.9259259259259258No Hit
CGGCAAAAATTAAAATTTTTCCCGCTTCGGCGTTATAACCTCACACTCAA10.9259259259259258No Hit
TCAGCAATCTTAAACTTCTTAGACGAATCACCAGAACGGAAAACATCCTT10.9259259259259258No Hit
GGTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC10.9259259259259258No Hit
AAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGAC10.9259259259259258No Hit
TATCAAAGCGCGCATAAATTTGAGCAGATTTGTCGTCACAGGTTGCGCCG10.9259259259259258No Hit
CCTACCTACGGGAGGCAGCAGGGGTTAGGTATGACCTTGCTCCCAACCAA10.9259259259259258No Hit
TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGC10.9259259259259258No Hit
TGCCTATGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATA10.9259259259259258No Hit

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA705.657469E-421.071428220-224