FastQCFastQC Report
Wed 8 May 2024
EGAF00005491713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005491713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77065
Total Bases23.1 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1330.1725815869720366No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1290.16739116330370465No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1280.16609355738662168No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1230.15960552780120676No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1180.15311749821579188No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1170.15181989229870888No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1160.1505222863816259No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1160.1505222863816259No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1140.14792707454745993No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1120.14533186271329396No Hit
CCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1120.14533186271329396No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1100.142736650879128No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1090.141439044962045No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1080.14014143904496204No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1080.14014143904496204No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1080.14014143904496204No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1070.13884383312787907No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1060.13754622721079607No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1060.13754622721079607No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.1362486212937131No Hit
TGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.1362486212937131No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.1362486212937131No Hit
TATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.1362486212937131No Hit
GATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1040.1349510153766301No Hit
TTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1030.13365340945954712No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1030.13365340945954712No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1030.13365340945954712No Hit
CATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1020.13235580354246415No Hit
TCTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1020.13235580354246415No Hit
TATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1020.13235580354246415No Hit
TACCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1010.13105819762538115No Hit
AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1000.12976059170829818No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC990.1284629857912152No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.1271653798741322No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.1271653798741322No Hit
TTGGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.1271653798741322No Hit
ATACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.1271653798741322No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.1271653798741322No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.1271653798741322No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.12586777395704923No Hit
ACGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.12586777395704923No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12457016803996628No Hit
GCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12457016803996628No Hit
ACGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12457016803996628No Hit
AGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12457016803996628No Hit
TAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12457016803996628No Hit
TGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.12327256212288328No Hit
ATGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.12327256212288328No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.12327256212288328No Hit
GTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.12327256212288328No Hit
ATTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC940.1219749562058003No Hit
TGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC940.1219749562058003No Hit
TTCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC940.1219749562058003No Hit
TAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.12067735028871733No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.12067735028871733No Hit
CTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11937974437163433No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11937974437163433No Hit
CTTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11937974437163433No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11937974437163433No Hit
CTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11937974437163433No Hit
TTTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11937974437163433No Hit
CCTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC910.11808213845455136No Hit
CATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.11678453253746836No Hit
GCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.11678453253746836No Hit
CGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.11678453253746836No Hit
AACCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
CCGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
AATCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
CCCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
TAGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
TCAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11548692662038539No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC880.11418932070330241No Hit
CTCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC880.11418932070330241No Hit
GTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC880.11418932070330241No Hit
GGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11289171478621941No Hit
ATGGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11289171478621941No Hit
GTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC860.11159410886913644No Hit
TTGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC860.11159410886913644No Hit
GAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC860.11159410886913644No Hit
ACCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11029650295205347No Hit
CCTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11029650295205347No Hit
GGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11029650295205347No Hit
CGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11029650295205347No Hit
GAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11029650295205347No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11029650295205347No Hit
CTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
AAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
GCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
ATCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
GTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
CAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
TCGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10899889703497047No Hit
GTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.1077012911178875No Hit
TACGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.1077012911178875No Hit
GTAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.1077012911178875No Hit
CCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.1077012911178875No Hit
TCCGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.1077012911178875No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.1077012911178875No Hit
TACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10640368520080452No Hit
GTTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10640368520080452No Hit
AATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10640368520080452No Hit
GGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10640368520080452No Hit
GTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10640368520080452No Hit
CCGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10510607928372152No Hit
ACTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10510607928372152No Hit
TTCGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10510607928372152No Hit
AAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10510607928372152No Hit
GTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10510607928372152No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10510607928372152No Hit
CGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10380847336663855No Hit
CCAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10380847336663855No Hit
TCTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10380847336663855No Hit
GTCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10380847336663855No Hit
TGACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10380847336663855No Hit
TGCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
GGGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
AGTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
TCGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
GGGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
CAGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
ACACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
TAGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
GACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10251086744955556No Hit
ATGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
TGTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
TGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
TGTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
AGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
AGGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
ATAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit
TGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10121326153247259No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)