FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62572
Sequences flagged as poor quality0
Sequence length301
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT1030.16461036885507893No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT1010.16141405101323275No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT990.15821773317138657No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT940.15022693856677108No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT930.14862877964584797No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT920.14703062072492487No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT920.14703062072492487No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT920.14703062072492487No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT910.1454324618040018No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT900.1438343028830787No Hit
CATTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT900.1438343028830787No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT900.1438343028830787No Hit
TCACCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT880.14063798504123248No Hit
GCATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT880.14063798504123248No Hit
TATTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT880.14063798504123248No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT880.14063798504123248No Hit
TACACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT870.1390398261203094No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT870.1390398261203094No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT840.13424534935754012No Hit
CACCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT840.13424534935754012No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT840.13424534935754012No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT840.13424534935754012No Hit
AACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT830.13264719043661702No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT830.13264719043661702No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT820.13104903151569391No Hit
CAAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT810.1294508725947708No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT810.1294508725947708No Hit
TGGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT810.1294508725947708No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT800.12785271367384773No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT800.12785271367384773No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT790.12625455475292463No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT790.12625455475292463No Hit
TCGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT780.12465639583200154No Hit
TACCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT780.12465639583200154No Hit
ATTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT780.12465639583200154No Hit
AGATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT780.12465639583200154No Hit
ACGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT770.12305823691107842No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT770.12305823691107842No Hit
CCTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT770.12305823691107842No Hit
GTCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT760.12146007799015535No Hit
TTTCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT760.12146007799015535No Hit
CTGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT760.12146007799015535No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT760.12146007799015535No Hit
TGATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT760.12146007799015535No Hit
CGCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT760.12146007799015535No Hit
CTTGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT750.11986191906923226No Hit
TGGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT750.11986191906923226No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT740.11826376014830915No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT740.11826376014830915No Hit
GTGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT740.11826376014830915No Hit
CCGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT740.11826376014830915No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT730.11666560122738606No Hit
CCCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT730.11666560122738606No Hit
GACACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT730.11666560122738606No Hit
GCAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT730.11666560122738606No Hit
TCCCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT730.11666560122738606No Hit
GTATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT730.11666560122738606No Hit
AGTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT720.11506744230646296No Hit
CACACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT720.11506744230646296No Hit
CATACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT720.11506744230646296No Hit
AACGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT710.11346928338553987No Hit
AATTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT710.11346928338553987No Hit
GTAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT710.11346928338553987No Hit
TCGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT700.11187112446461675No Hit
CGATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT700.11187112446461675No Hit
TGTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT700.11187112446461675No Hit
TAACCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT700.11187112446461675No Hit
TGTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT700.11187112446461675No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT700.11187112446461675No Hit
ACACCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT690.11027296554369367No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT690.11027296554369367No Hit
CTGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT690.11027296554369367No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT690.11027296554369367No Hit
GTCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT680.10867480662277056No Hit
AACCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT680.10867480662277056No Hit
AGGCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT680.10867480662277056No Hit
GTTTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
AAGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
GGCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
ATGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
TTGGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
TTGCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT670.10707664770184748No Hit
ACTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCC660.10547848878092436No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT660.10547848878092436No Hit
GCCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT660.10547848878092436No Hit
TGCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT660.10547848878092436No Hit
TATACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT660.10547848878092436No Hit
TTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCC660.10547848878092436No Hit
TGAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
CGAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
TCCGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
GTGCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
GTCCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
TCTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
TCGGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
CACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCC650.10388032986000129No Hit
CCGGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
CTCCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
TAGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
ACGGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT650.10388032986000129No Hit
ACCACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
GGATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
CCAACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
CCTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
CCAGCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
ACGTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
CAGCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
TTGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
GAATCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
GGTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
GGGCCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT640.10228217093907817No Hit
GTTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT630.10068401201815509No Hit
GGCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT630.10068401201815509No Hit
TAGACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT630.10068401201815509No Hit
AGTACCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT630.10068401201815509No Hit
ACCTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGACCAAAAGT630.10068401201815509No Hit
CTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGATGGCC630.10068401201815509No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)