FastQCFastQC Report
Wed 8 May 2024
EGAF00005492195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64119
Total Bases19.2 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC1100.171556013038257No Hit
TAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC1070.16687721268266814No Hit
TTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC1070.16687721268266814No Hit
ATCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC1020.15907921209002013No Hit
TTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC1000.1559600118529609No Hit
CTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC970.1512812114973721No Hit
TCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC970.1512812114973721No Hit
CTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC970.1512812114973721No Hit
ATAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC960.14972161137884246No Hit
CCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC950.14816201126031286No Hit
ATCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC940.14660241114178324No Hit
ATATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC930.14504281102325364No Hit
ACTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC930.14504281102325364No Hit
TTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC910.14192361078619442No Hit
TCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC900.1403640106676648No Hit
CCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC900.1403640106676648No Hit
ACCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC890.1388044105491352No Hit
TAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC890.1388044105491352No Hit
TCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC890.1388044105491352No Hit
GTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC880.13724481043060557No Hit
TCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC880.13724481043060557No Hit
GTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC870.13568521031207598No Hit
TCCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC860.13412561019354638No Hit
TTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC860.13412561019354638No Hit
CTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC860.13412561019354638No Hit
TTCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC840.13100640995648716No Hit
CCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC840.13100640995648716No Hit
ATACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC840.13100640995648716No Hit
CTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC840.13100640995648716No Hit
CAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC830.12944680983795756No Hit
TTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC830.12944680983795756No Hit
TCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC830.12944680983795756No Hit
TACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC830.12944680983795756No Hit
ACGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC830.12944680983795756No Hit
ATGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC830.12944680983795756No Hit
TACCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC820.12788720971942794No Hit
TTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC820.12788720971942794No Hit
TGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC820.12788720971942794No Hit
AGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC820.12788720971942794No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC810.12632760960089834No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC810.12632760960089834No Hit
TGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC810.12632760960089834No Hit
CTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC810.12632760960089834No Hit
TCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC810.12632760960089834No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC810.12632760960089834No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC800.12476800948236873No Hit
TATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
CACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
AAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
TAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
TGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
AACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
TATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC790.12320840936383912No Hit
ACAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC780.1216488092453095No Hit
CCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC780.1216488092453095No Hit
AAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC780.1216488092453095No Hit
ATCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC770.1200892091267799No Hit
CTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC770.1200892091267799No Hit
GGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC770.1200892091267799No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC760.11852960900825028No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC760.11852960900825028No Hit
TGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC760.11852960900825028No Hit
GAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC760.11852960900825028No Hit
ACATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC760.11852960900825028No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC750.11697000888972067No Hit
CCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
AAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC750.11697000888972067No Hit
ACCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC750.11697000888972067No Hit
GTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
CACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC750.11697000888972067No Hit
GGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
ATGGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
AAGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC750.11697000888972067No Hit
CTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC740.11541040877119106No Hit
TTAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC740.11541040877119106No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC740.11541040877119106No Hit
ATTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC740.11541040877119106No Hit
CTCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC730.11385080865266145No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC730.11385080865266145No Hit
CAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC730.11385080865266145No Hit
GCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC730.11385080865266145No Hit
CATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC730.11385080865266145No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC730.11385080865266145No Hit
CAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC730.11385080865266145No Hit
GTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC730.11385080865266145No Hit
TGTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC730.11385080865266145No Hit
GGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC720.11229120853413184No Hit
TGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC720.11229120853413184No Hit
TCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC720.11229120853413184No Hit
ACACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC720.11229120853413184No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC720.11229120853413184No Hit
CCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC720.11229120853413184No Hit
CCAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC720.11229120853413184No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC710.11073160841560223No Hit
GTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC710.11073160841560223No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC710.11073160841560223No Hit
CTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC710.11073160841560223No Hit
TACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC710.11073160841560223No Hit
ATGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC710.11073160841560223No Hit
TTTGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC710.11073160841560223No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC710.11073160841560223No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC700.10917200829707262No Hit
CACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC700.10917200829707262No Hit
CCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC700.10917200829707262No Hit
TTGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC700.10917200829707262No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC700.10917200829707262No Hit
TCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC700.10917200829707262No Hit
AGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
CGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC690.107612408178543No Hit
TAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
GTCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
GGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
ATTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC690.107612408178543No Hit
GAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC690.107612408178543No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC690.107612408178543No Hit
CGAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
TTGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
GCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
ACCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC680.10605280806001341No Hit
AGTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
GTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
TTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
TTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC680.10605280806001341No Hit
CTCGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
GTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC680.10605280806001341No Hit
TCGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
TACCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC680.10605280806001341No Hit
CATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC680.10605280806001341No Hit
TCAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
GTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC680.10605280806001341No Hit
CGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC680.10605280806001341No Hit
GCTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
CAAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
ACGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
AGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
CTGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
CTTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
CCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
TGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC670.10449320794148381No Hit
TCGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
AAAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
GTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC670.10449320794148381No Hit
AGTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC660.1029336078229542No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC660.1029336078229542No Hit
TGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
AATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
TACGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
CGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
ACTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
AGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
TTTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC660.1029336078229542No Hit
CCTGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit
TGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit
CAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit
GATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit
CATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC650.10137400770442459No Hit
AACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit
AATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit
CATCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCTAGCC650.10137400770442459No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)