FastQCFastQC Report
Wed 8 May 2024
EGAF00005492207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71560
Total Bases21.5 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC1060.14812744550027948No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC1050.14673001676914477No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC960.13415315818893236No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC960.13415315818893236No Hit
CCAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC960.13415315818893236No Hit
AAACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC920.1285634432643935No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC910.1271660145332588No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC900.1257685858021241No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC890.12437115707098938No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC890.12437115707098938No Hit
TGTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC870.12157629960871995No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC860.12017887087758525No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC850.11878144214645053No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC850.11878144214645053No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC850.11878144214645053No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC830.1159865846841811No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC830.1159865846841811No Hit
TCACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC830.1159865846841811No Hit
ACCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC830.1159865846841811No Hit
ATCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC820.11458915595304639No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC820.11458915595304639No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC820.11458915595304639No Hit
ACGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC810.11319172722191169No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC810.11319172722191169No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC800.11179429849077697No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC800.11179429849077697No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC800.11179429849077697No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC800.11179429849077697No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC800.11179429849077697No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
CACACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
TATACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC790.11039686975964226No Hit
CCTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC780.10899944102850753No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC780.10899944102850753No Hit
CCTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC770.10760201229737285No Hit
TCGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC770.10760201229737285No Hit
AAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC770.10760201229737285No Hit
TTGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC760.10620458356623813No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC760.10620458356623813No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC750.10480715483510342No Hit
GTTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC750.10480715483510342No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC740.10340972610396869No Hit
CTACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC740.10340972610396869No Hit
TCCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC740.10340972610396869No Hit
CCGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC730.10201229737283397No Hit
TCTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC730.10201229737283397No Hit
CAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC730.10201229737283397No Hit
TGGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC730.10201229737283397No Hit
CAACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC730.10201229737283397No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC720.10061486864169927No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC720.10061486864169927No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)