FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005492215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68069
Sequences flagged as poor quality0
Sequence length301
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATCCTA1100.0294.994872
ACGCCTA750.0294.994872
CGGCCTA900.0294.994872
GATCCTA1150.0294.994872
ATTACCT450.0294.994871
GGTCCTA1100.0294.994872
GCGCCTA450.0294.994872
GACCCTA650.0294.994872
TTCCCTA750.0294.994872
TGACCTA1500.0294.994872
TCTACCT450.0294.994871
CCCCCTA1300.0294.994872
TTGCCTA450.0294.994872
GAACCTA900.0294.994872
CGTCCTA900.0294.994872
GTGACCT550.0294.994871
CACCCTA1250.0294.994872
TGCACCT550.0294.994871
AGGTCCT450.0294.994871
TGATCCT206.143091E-8294.994841
Produced by FastQC (version 0.11.5)