FastQCFastQC Report
Wed 8 May 2024
EGAF00005492303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31094
Total Bases9.3 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC630.20261143628995948No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC550.1768829999356789No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC530.17045089084710877No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC530.17045089084710877No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC510.16401878175853862No Hit
ATTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC510.16401878175853862No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC510.16401878175853862No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC500.16080272721425354No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC500.16080272721425354No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC480.15437061812568342No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC470.15115456358139834No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC470.15115456358139834No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC470.15115456358139834No Hit
AATTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC470.15115456358139834No Hit
CCAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC470.15115456358139834No Hit
AAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC470.15115456358139834No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC460.14793850903711325No Hit
GTACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC460.14793850903711325No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC460.14793850903711325No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC460.14793850903711325No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC460.14793850903711325No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC450.1447224544928282No Hit
TATACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC450.1447224544928282No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC450.1447224544928282No Hit
ACCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC450.1447224544928282No Hit
CACACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC440.14150639994854314No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC440.14150639994854314No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC430.13829034540425805No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC430.13829034540425805No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC420.13507429085997297No Hit
AACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC420.13507429085997297No Hit
ATCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC420.13507429085997297No Hit
GGCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC420.13507429085997297No Hit
TAGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC420.13507429085997297No Hit
TACGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC420.13507429085997297No Hit
AATACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
TGCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
TCTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
GTAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC410.1318582363156879No Hit
GCAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC400.12864218177140285No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC400.12864218177140285No Hit
GGGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC400.12864218177140285No Hit
CCGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC400.12864218177140285No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
CGATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
TCGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
TGAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
TACCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
CTCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
CAACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
AGTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC390.12542612722711777No Hit
CATTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
AAGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
CAGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
GTGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
GAATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
GTATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
TGATCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC380.1222100726828327No Hit
AACCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
CCACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
ATACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
CGAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
AGCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
CATACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
ACCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
ACTCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC370.11899401813854762No Hit
TCACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC360.11577796359426257No Hit
AGAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC360.11577796359426257No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC360.11577796359426257No Hit
AACGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
GTCACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
ACCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
GGGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
AGCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
AATCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
GCTCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
AAAGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
ACGGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
CAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
CTGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
CAGGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC350.11256190904997748No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
TATTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
ACTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
TCGGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
AGGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
TATCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
ACGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
TGGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
AATGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC340.10934585450569241No Hit
CGCTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
CCTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
CAGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
TGGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
GAAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
CTACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
ACGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
TTAGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
ACAGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
TTCCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
CCGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
CACGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
TTCGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
GGAACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
AAACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC330.10612979996140735No Hit
TAGCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
GGTCCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
TGTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
GACGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
ATGACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
GCACCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
GGTACCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
TGTTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
TAGTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit
TATGCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCC320.10291374541712228No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)