FastQCFastQC Report
Wed 8 May 2024
EGAF00005492304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31094
Total Bases9.3 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA8682.791535344439442No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA7632.4538496172895092No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA7352.3638000900495273No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA7262.334855599150962No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA6992.2480221264552647No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA6302.0261143628995946No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA5511.7720460539010743No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA5431.7463176175467936No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA4871.5662185630668297No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA4651.495465363092558No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA4611.4826011449154177No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA4591.4761690358268476No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA3991.2832057631697433No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA3691.1867241268411912No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA1730.5563774361613173No Hit
GGACTACCCGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA1430.45989579983276513No Hit
GGACTACAAGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA1320.4245191998456294No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA1220.3923586544027787No Hit
GGACTACTCGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA1220.3923586544027787No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1210.3891425998584936No Hit
GGACTACACGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA1180.3794944362256384No Hit
GGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA1130.3634141635042131No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1110.35698205441564285No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1090.35054994532707273No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA1050.3376857271499325No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA1050.3376857271499325No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA970.31195729079565193No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA960.30874123625136685No Hit
GGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA950.30552518170708176No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA910.2926609635299415No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGA880.2830127998970863No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA870.2797967453528012No Hit
GGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA830.2669325271756609No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA800.2572843635428057No Hit
GGACTACAAGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA780.25085225445423553No Hit
GGACTACCGGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA740.23798803627709525No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA740.23798803627709525No Hit
GGACTACACGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA720.23155592718852513No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA720.23155592718852513No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA700.22512381809995496No Hit
GGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA690.2219077635556699No Hit
GGACTACTGGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA690.2219077635556699No Hit
GGACTACCCGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA670.2154756544670998No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA660.2122595999228147No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA640.20582749083424456No Hit
GGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA640.20582749083424456No Hit
GGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA610.19617932720138934No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA590.1897472181128192No Hit
GGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA570.18331510902424905No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA560.18009905447996397No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA540.17366694539139385No Hit
GGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA540.17366694539139385No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA530.17045089084710877No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA520.1672348363028237No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA470.15115456358139834No Hit
GGACTACACGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCA470.15115456358139834No Hit
GGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA470.15115456358139834No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA460.14793850903711325No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA450.1447224544928282No Hit
GGACTACAAGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCA440.14150639994854314No Hit
GGACTACTCGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCA440.14150639994854314No Hit
GGACTACCCGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCA430.13829034540425805No Hit
GGACTACACGGGTTTCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCA400.12864218177140285No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA380.1222100726828327No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCA370.11899401813854762No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA370.11899401813854762No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA370.11899401813854762No Hit
GGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAATCTCA370.11899401813854762No Hit
GGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTCA350.11256190904997748No Hit
GGACTACTAGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCA320.10291374541712228No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)