FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences288337
Sequences flagged as poor quality0
Sequence length248
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGCTATTTGTCGTGATGCGGTAGGGATCAC207477.195399827285433No Hit
GTCGTGACTGGGAAAACCCTGGAACGGGGTCGTGATAAGGTTACCATCAC177636.160499693067488No Hit
GTCGTGACTGGGAAAACCCTGGGAAATAGTCGTGATCGAATAACTATCAC49701.7236775023670219No Hit
GTCGTGACTGGGAAAACCCTGGATTGTAGTCGTGATATTAGTAGTATCAC39231.3605607327536875No Hit
GTCGTGACTGGGAAAACCCTGGGTCTTCGTCGTGATGACTGCGGGATCAC34001.1791757561464535No Hit
GTCGTGACTGGGAAAACCCTGGCAAACCGTCGTGATCGTGCAACTATCAC33441.1597540378099238No Hit
GTCGTGACTGGGAAAACCCTGGGCATCCGTCGTGATTCAACGACCATCAC28460.9870394711743551No Hit
GTCGTGACTGGGAAAACCCTGGGTTGCTGTCGTGATATGTTGAAGATCAC24690.8562896888016452No Hit
GTCGTGACTGGGAAAACCCTGGAGGAAAGTCGTGATTGAGAGGTGATCAC21600.7491234215518646No Hit
GTCGTGACTGGGAAAACCCTGGGATGCGGTCGTGATAGTAAGTACATCAC17900.6208013539712212No Hit
GTCGTGACTGGGAAAACCCTGGAGATCCGTCGTGATTTTTATACCATCAC16180.5611489333661653No Hit
GTCGTGACTGGGAAAACCCTGGCATTCTGTCGTGATTGGGACTGTATCAC14050.48727704040757863No Hit
GTCGTGACTGGGAAAACCCTGGAGATGGGTCGTGATTGTGAGTACATCAC13190.4574508301050507No Hit
GTCGTGACTGGGAAAACCCTGGTAACGGGTCGTGATAACAGCGGCATCAC11870.411671065454659No Hit
GTCGTGACTGGGAAAACCCTGGAATTCGGTCGTGATTGAGATTACATCAC10910.37837669116346495No Hit
GTCGTGACTGGGAAAACCCTGGAATAGTGTCGTGATCAGTGAGAAATCAC10650.36935946479293325No Hit
GTCGTGACTGGGAAAACCCTGGTTTCGCGTCGTGATATACCACTGATCAC10550.36589130080426724No Hit
GTCGTGACTGGGAAAACCCTGGTATACCGTCGTGATAACTTCAGGATCAC10170.35271227764733626No Hit
GTCGTGACTGGGAAAACCCTGGTGTTTCGTCGTGATATTGTCAAGATCAC9940.3447355004734044No Hit
GTCGTGACTGGGAAAACCCTGGTGCTAAGTCGTGATTCGATACAGATCAC9870.3423077856813382No Hit
GTCGTGACTGGGAAAACCCTGGGAAGCTGTCGTGATGATTCGCCTATCAC9440.32739468053007414No Hit
GTCGTGACTGGGAAACCCCTGGCTATTTGTCGTGATGCGGTAGGGATCAC9430.32704786413120757No Hit
GTCGTGACTGGGAAAACCCTGGCGAGCGGTCGTGATCATCTACCCATCAC8800.3051984310026115No Hit
GTCGTGACTGGGAAAACCCTGGCCCGTCGTCGTGATCCATATACGATCAC8460.293406673441147No Hit
GTCGTGACTGGGAAAACCCTGGTATAGTGTCGTGATTATATTAAGATCAC8100.28092128308194925No Hit
GTCGTGACTGGGAAAACCCTGGACTCTGGTCGTGATGTGGTGAGAATCAC7670.26600817793068526No Hit
GTCGTGACTGGGAAAACCCTGGAGGGTAGTCGTGATTCGACCACCATCAC6830.23687560042589054No Hit
GTCGTGACTGGGAACACCCTGGCTATTTGTCGTGATGCGGTAGGGATCAC6460.2240433936678262No Hit
GTCGTGACTGGGAAAACCCTGGGACACCGTCGTGATGCGCCTAATATCAC6140.21294526890409485No Hit
GTCGTGACTGGGAAAACCCTGGTACCCAGTCGTGATGACAGCCCTATCAC6030.2091302885165622No Hit
GTCGTGACTGGGAAAACCCTGGATAAACGTCGTGATACTCACGTGATCAC5450.1890149373822992No Hit
GTCGTGACTGGGAAAACCCTGGCTGAGTGTCGTGATGATTCAGCAATCAC5410.1876276717868328No Hit
GTCGTGACTGGGAAAACCCTGGCAGGAAGTCGTGATTGGTCTTGCATCAC5410.1876276717868328No Hit
GTCGTGACTGGGAAAACCCTGGCCCAACGTCGTGATGACCCGATAATCAC5310.18415950779816673No Hit
GTCGTGACTGGGAAAACCCTGGTAACTTGTCGTGATTACTTGAGCATCAC4900.16994003544463596No Hit
GTCGTGACTGGGAAAACCCGGGCTATTTGTCGTGATGCGGTAGGGATCAC4090.14184790713644102No Hit
GTCGTGACTGGGAAAACCCTGGATAAACGTCGTGATACTCCCGTGATCAC3970.1376861103500418No Hit
GTCGTGACTGGGAAAACCCTGGCCCAGGGTCGTGATTTCCTCCTTATCAC3910.13560521195684216No Hit
GTCGTGACTGGGAAAACCCTGGTACGACGTCGTGATATAGTCACTACCTC3400.11791757561464536No Hit
GTCGTGACTGGGAAAACCCTGGGAATTGGTCGTGATTCATCGTACATCAC3270.1134089624293795No Hit
GTCGTGACTGGGAAAGCCCTGGCTATTTGTCGTGATGCGGTAGGGATCAC3010.1043917360588478No Hit
GTCGTGACTGGGAAAACCCTGGACACCGGTCGTGATACCAACTAGATCAC2930.10161720486791498No Hit
GTCGTGACTGGGAAAACCCTGGACCCCCGTCGTGATATCCAGAACATCAC2890.10022993927244857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)