FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128797
Sequences flagged as poor quality0
Sequence length248
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGAATTACGTCGTGATAGAGAATCGCGATG62394.844056926791773No Hit
GTCGTGACTGGGAAAACCCTGGCCTTACGTCGTGATTCTAACTTTCGATG60174.671692663648998No Hit
GTCGTGACTGGGAAAACCCTGGATAGGTGTCGTGATATGTCGTATCGATG50313.906146882303159No Hit
GTCGTGACTGGGAAAACCCTGGTCTAAAGTCGTGATATCGAGTCGCGATG42683.313741779699838No Hit
GTCGTGACTGGGAAAACCCTGGATTCCAGTCGTGATAGAACGGGGCGATG39353.0551953849856752No Hit
GTCGTGACTGGGAAAACCCTGGAAATAGGTCGTGATCCAAAACCCCGATG37002.8727377190462513No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTAGTCGTGATTCACTCAAACGATG31652.457355373184158No Hit
GTCGTGACTGGGAAAACCCTGGCCTGTGGTCGTGATTATCCAGAACGATG28232.191821238072315No Hit
GTCGTGACTGGGAAAACCCTGGATATAGGTCGTGATTGATAGAAACGATG28122.1832806664751505No Hit
GTCGTGACTGGGAAAACCCTGGGCTGGAGTCGTGATCTCCAGAACCGATG27782.156882536083915No Hit
GTCGTGACTGGGAAAACCCTGGTATTTCGTCGTGATCCAGAACCGCGATG23201.8012841914019737No Hit
GTCGTGACTGGGAAAACCCTGGCCTCCTGTCGTGATCCACAGAACCGATG22891.7772153078099644No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGGTAGCGATG18631.4464622623197745No Hit
GTCGTGACTGGGAAAACCCTGGTATTTCGTCGTGATCCAGAACCCCGATG18271.4185113007290542No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGGAAGCGATG17521.360280130748387No Hit
GTCGTGACTGGGAAAACCCTGGTTCAGTGTCGTGATTCAAGGGAACGATG17311.3439754031538No Hit
GTCGTGACTGGGAAAACCCTGGCCATCCGTCGTGATCCCTTGACCCGATG14311.111050723231131No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGGGAGCGATG11780.914617576496347No Hit
GTCGTGACTGGGAAAACCCTGGCACTTGGTCGTGATCCAGAACCCCGATG8670.6731523249765134No Hit
GTCGTGACTGGGAAAACCCTGGCTAAGCGTCGTGATTGAACCCTGCGATG8020.6226853109932684No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGGAACCGATG7840.6087098301979084No Hit
GTCGTGACGAAAACCCTGGATAGGTGTCGTGATATGTCGTATGACCGATG7720.5993928430010015No Hit
GTCGTGACTGGGAAAACCCGGGTCTAAAGTCGTGATATCGAGTCGCGATG7150.5551371538156945No Hit
GTCGTGACGAAAACCCTGGATAGGTGTCGTCATATGTCGTATGACCGATG6940.5388324262211076No Hit
GTCGTGACGAAAACCCTCCATAGGTGTCGTCATATGTCGTATGACCGATG6560.509328633430903No Hit
GTCGTGACTGGGAAAACCCGGGAATTACGTCGTGATAGAGAATCGCGATG5930.46041445064714237No Hit
GTCGTGACTGGGAAAACCCTGGGCGACGGTCGTGATATTCCTTGACGATG5540.43013424225719543No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTAGTCGTGATTCAATCAAACGATG5000.38820779987111503No Hit
GTCGTGACTGGGAAAACCCGGGATAGGTGTCGTGATATGTCGTATCGATG4820.3742323190757549No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTAGTCGTGATTCACTCAAGCGATG3770.2927086811028207No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGAAACCGATG3040.23603034232163791No Hit
GTCGTGACTGGGAAAACCCTGGAAAGTAGTCGTGATACAAGAGTGCGATG2800.2173963679278244No Hit
GTCGTGACGAAAACCCTCCATAGGTGTCGTCATATTTCGTATGACCGATG2780.21584353672833997No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGGGACCGATG2740.212737874329371No Hit
GTCGTGACGAAAACCCTCCATAGGTGTCGTGATATGTCGTATGACCGATG2720.21118504312988656No Hit
GTCGTGACTGGGAAAACCCTGGCCCTGCGTCGTGATCTTGGCGTCCGATG2590.2010916403332376No Hit
GTGGTGACTGGGAAAACCCTGGAATTACGTCGTGATAGAGAATCGCGATG2210.17158784754303283No Hit
GTGGTGACTGGGAAAACCCTGGCCTTACGTCGTGATTCTAACTTTCGATG2140.16615293834483721No Hit
GTCGTGACGAAAACCCTCGATAGGTGTCGTCATATGTCGTATGACCGATG2110.16382369154561055No Hit
GTCGTGACTGGGAAAACCCTGGAAATAGGTCGTGATCCAGAACCCCGATG2080.16149444474638383No Hit
GTGGTGACTGGGAAAACCCGGGAATTACGTCGTGATAGAGAATCGCGATG2010.15605953554818824No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTACTCGTGATTCACTCAAACGATG1990.15450670434870378No Hit
GTGGTGACTGGGAAAACCCGGGTCTAAAGTCGTGATATCGAGTCGCGATG1980.15373028874896152No Hit
GTCGTGACTGGGAAAACCCTGGCCCTGCGTCGTGATCCGTGAGTGCGATG1920.14907179515050817No Hit
GTGGTGACTGGGAAAACCCTGGTCTAAAGTCGTGATATCGAGTCGCGATG1880.14596613275153925No Hit
GTCGTGACTGGGAAAACCCTGGATCAGCGTCGTGATCAGAACCGTCGATG1670.12966140515695243No Hit
GTCGTGACTGGGAAAACCCGGGTATTTCGTCGTGATCCAGAACCGCGATG1620.12577932715824128No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGAAAGCGATG1600.12422649595875682No Hit
GTCGTGACTGGGAAAACCCGGGTTCAGTGTCGTGATTCAAGGGAACGATG1550.12034441796004566No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTAGTCGTGATTCAATCAAGCGATG1490.11568592436159227No Hit
GTCGTGACTGGGAAAACCCTGGTTGCGGGTCGTGAACCCTGGTACCGATG1420.11025101516339665No Hit
GTCGTGACTGGGAAAACCCTGGGCGACGGTCGTGATATTCCATGACGATG1380.10714535276442774No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTAGTCGTGATTCACTCAACCGATG1340.10403969036545883No Hit
GTCGTGACGAAAACCCTGCATAGGTGTCGTCATATGTCGTATGACCGATG1310.10171044356623213No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)