FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1408871
Sequences flagged as poor quality0
Sequence length248
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGTGTATCGTCGTGATGAAGACCCGTAGCT21450.15224956720664987No Hit
GTCGTGACTGGGAAAACCCTGGCCGGATGTCGTGATCAAAAGCCATAGCT18000.12776187457900687No Hit
GTCGTGACTGGGAAAACCCTGGCACCAGGTCGTGATCTAAATGAGTAGCT17260.12250944195742548No Hit
GTCGTGACTGGGAAAACCCTGGATAATGGTCGTGATCGCCAGGGGTAGCT15810.11221751317189436No Hit
GTCGTGACTGGGAAAACCCTGGGACTACGTCGTGATACGATGAGCTAGCT15200.10788780520005026No Hit
GTCGTGACTGGGAAAACCCTGGGTTGCGGTCGTGATCCCATGGGGTAGCT14710.10440984305873284No Hit
GTCGTGACTGGGAAAACCCTGGAAGGCAGTCGTGATATTCGGGACTAGCT14710.10440984305873284No Hit
GTCGTGACTGGGAAAACCCTGGTTGAAAGTCGTGATCTCATGCAGTAGCT14510.10299026667452166No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)