FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3098849
Sequences flagged as poor quality0
Sequence length248
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGCGTAACGTCGTGATCACTAACAAGATCA55660.17961507643644464No Hit
GTCGTGACTGGGAAAACCCTGGAGCTGCGTCGTGATGGCATGGACGATCA52910.1707408137666598No Hit
GTCGTGACTGGGAAAACCCTGGTGCTCTGTCGTGATCTCCCGCCCGATCA43270.13963248935330505No Hit
GTCGTGACTGGGAAAACCCTGGCCTGACGTCGTGATGACTTCGCCGATCA41510.13395296124464276No Hit
GTCGTGACTGGGAAAACCCTGGCGAAGGGTCGTGATGTAAACGGAGATCA38390.12388470687019601No Hit
GTCGTGACTGGGAAAACCCTGGGAGCCCGTCGTGATGTCTAGAGCGATCA37970.1225293649351743No Hit
GTCGTGACTGGGAAAACCCTGGTTGCAAGTCGTGATATTAAGGGGGATCA34800.11229976033036781No Hit
GTCGTGACTGGGAAAACCCTGGTTGTGGGTCGTGATGCCCCGCCCGATCA34780.11223522023822392No Hit
GTCGTGACTGGGAAAACCCTGGCTGCGTGTCGTGATCAAGCGGTGGATCA33930.10949226632210862No Hit
GTCGTGACTGGGAAAACCCTGGTAGTGAGTCGTGATGCCCTAGGGGATCA32480.10481310964167664No Hit
GTCGTGACTGGGAAAACCCTGGCGCGCTGTCGTGATAAGAGCTAGGATCA31370.10123113452769077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)