FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55593
Sequences flagged as poor quality0
Sequence length248
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCTGGGAATACCCTCCCTCTCAAGATACTCGATG11031.9840627417120862No Hit
GTCGTGACTGGGAAAACCCTGGCAGACTGTCGTGATCTCAGATTACAATG7981.4354325184825427No Hit
GTCGTGACTGGGAAAACCCTGGTCTCCGGTCGTGATTATAGGGGGCGATG3560.6403683917039915No Hit
GTCGTGACTGGGAAAACCTTGGAATACCCTCCCTCTCAAGATACTCGATG3290.5918011260410483No Hit
GTCGTGACTGGGAAAACCTGGGAATACCCTGCCTCTCAAGATACTCGATG3280.5900023384239024No Hit
GTCGTGACTGGGAAAACCCTGGAGTCTTGTCGTGATTACAGATATCAATG2010.3615563110463548No Hit
GTCGTGACTGGGAAAACCCTGGAGCGAAGTCGTGATCCCACTCCCCGATG1410.25362905401759217No Hit
GTCGTGACTGGGAAAACCCTGGGGTCAGGTCGTGATTCGAAGTATCGATG1370.24643390354900796No Hit
GTCGTGACTGGGAAAACCCTGGGATGTCGTCGTGATCCCTCATTCCGATG1350.24283632831471588No Hit
GTCGTGACTGGGAAAACCCTGGACAATCGTCGTGATGATGGAGAGCGATG1220.2194520892918173No Hit
GTCGTGACTGGGAAAACCCTGGTCTCCGGTCGTGATTATAGGGGCCGATG1090.19606785026891876No Hit
GTCGTGACTGGGAAAACCCTGGTCTCCGGTCGTGATTATAGGGCGCGATG990.17807997409745832No Hit
GTCGTGACTGGGAAAACCCTGGTCTCCGGTCGTGATTATAGGCGGCGATG900.16189088554314393No Hit
GTCGTGACTGGGAAAACCTTGGAATACCCTGCCTCTCAAGATACTCGATG900.16189088554314393No Hit
GTCGTGACTGGGAAAACCCTGGGTTGCCGTCGTGATAGATAACCCGGAAG670.12051877034878493No Hit
GTCGTGACTGGGAAAACCCTGGTCTCCGGTCGTGATTATAGGCGCCGATG620.1115248322630547No Hit
GTCGTGACTGGGAAAACCCTGGCCTCGTGTCGTGATACTAACGGTCGATG620.1115248322630547No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)