FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences217435
Sequences flagged as poor quality0
Sequence length248
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGGCCGGGGTCGTGATATAGCAGTCCAGAT40131.8456090325844505No Hit
GTCGTGACTGGGAAAACCCTGGGTGTACGTCGTGATAACCAACCACAGAT9470.43553245797594686No Hit
GTCGTGACTGGGAAAACCCTGGTGAGACGTCGTGATAGTGAGTGACAGAT6920.3182560305378619No Hit
GTCGTGACTGGGAAAACCCTGGGGTTCGGTCGTGATGGCTTTGAGCAGAT5630.2589279554809483No Hit
GTCGTGACTGGGAAAACCCTGGTGCGCGGTCGTGATAAGGTAGGCCAGAT5050.23225331708326627No Hit
GTCGTGACTGGGAAAACCCTGGCATTAAGTCGTGAACAAGTACGACAGAT5050.23225331708326627No Hit
GTCGTGACTGGGAAAACCCTGGGGACCAGTCGTGATTGTGCCAGCCAGAT4800.2207556281187481No Hit
GTCGTGACTGGGAAAACCCTGGTCGGTTGTCGTGATATTGCTATTCAGTT4280.19684043507255042No Hit
GTCGTGACTGGGAAAACCCTGGGATGTTGTCGTGATAACATCCCCCAGAT4110.1890220065766781No Hit
GTCGTGACTGGGAAAACCCTGGGCACCAGTCGTGATTCCCTGTCACAGAT3920.18028376296364432No Hit
GTCGTGACTGGGAAAACCCTGGTAATAGGTCGTGATCCAAACCCCCAGAT3580.16464690597189965No Hit
GTCGTGACTGGGAAAACCCTGGATGTACGTCGTGATTAGTACCCCCAGAT3400.1563685699174466No Hit
GTCGTGACTGGGAAAACCCTGGAGACAGGTCGTGATGCATATCGGCAGAT3260.14992986409731643No Hit
GTCGTGACTGGGAAAACCCTGGATCTGGGTCGTGATACGTACGGCCAGAT3230.14855014142157427No Hit
GTCGTGACTGGGAAAACCCTGGTTTGCAGTCGTGATCTTGAGCTTCAGAT3110.14303125071860556No Hit
GTCGTGACTGGGAAAACCCTGGGTATTCGTCGTGATGGAGACGGCCAGAT3010.13843217513279832No Hit
GTCGTGACTGGGAAAACCCTGGCACCCTGTCGTGATTTAGAGAGGCAGAT2760.12693448616828015No Hit
GTCGTGACTGGGAAAACCCTGGATGCCAGTCGTGATTAGAAGATGCAGGA2740.12601467105111872No Hit
GTCGTGACTGGGAAAACCCTGGATTCAGGTCGTGATGGCTTCGGTCAGAT2350.10807827626647043No Hit
GTCGTGACTGGGAAAACCCTGGTGTTTGGTCGTGATAATCAGGGGCAGAT2330.10715846114930899No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)