EGAF00005492906 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005492906
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1749833
Sequences flagged as poor quality	0
Sequence length	248
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCGTGACTGGGAAAACCCTGGCCCAGTGTCGTGATGGCATGTGTTTAGG	5378	0.30734361507641017	No Hit
GTCGTGACTGGGAAAACCCTGGGAGACTGTCGTGATAACGTATTCTTAGG	2757	0.1575578926674717	No Hit
GTCGTGACTGGGAAAACCCTGGGTACTTGTCGTGATGAGTGTGATTTAGG	2603	0.1487570528158973	No Hit
GTCGTGACTGGGAAAACCCTGACCCTGCCGTGCCTAAAAAAAAAGTTAGG	2444	0.13967047141070033	No Hit
GTCGTGACTGGGAAAACCCTGGATTTCAGTCGTGATACCATGTTATTAGG	2245	0.12829795757652301	No Hit
GTCGTGACTGGGAAAACCCTGGTATTGGGTCGTGATAACGGCGTCTTAGG	1908	0.10903897686236344	No Hit
GTCGTGACTGGGAAAACCCTGACCCTGCCGTGCCTAAACCACAAGTTAGG	1810	0.10343844241136155	No Hit
GTCGTGACTGGGAAAACCCTGGGTTCGTGTCGTGATCGGTAGTAGTTAGG	1761	0.1006381751858606	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTGAC	162550	241.12413	2
ACTGGGA	162035	240.6897	7
TGGGAAA	159480	239.21713	9
CGTGACT	163765	236.13458	3
TGACTGG	166645	235.0222	5
GTGACTG	167295	234.71849	4
CTGGGAA	165545	234.4603	8
GACTGGG	167845	234.15967	6
CGTGACA	2275	205.54651	3
ACGGGGA	2245	198.43245	7
CGTGACG	1550	188.36038	3
GTGGTGA	4650	181.75832	1
GACGGGG	2675	181.48431	6
CGTGGCT	1950	180.78508	3
GTGACAG	2720	175.00114	4
TCGAGAC	340	174.68077	2
TGACGGG	2490	174.57243	5
TGGTGAC	4890	159.87434	2
GTGACGG	2830	156.64333	4
TGACAGG	2995	156.05261	5