FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1427039
Sequences flagged as poor quality0
Sequence length248
%GC56

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGGAATTAGTCGTGATGTCGTGTACTTAGG43510.3048970630795655No Hit
GTCGTGACTGGGAAAACCCTGGATAGCGGTCGTGATCTTATAGCATTAGG28720.20125588719018891No Hit
GTCGTGACTGGGAAAACCCTGGCTACAAGTCGTGATAACGTAAACTTAGG25430.1782011563804493No Hit
GTCGTGACTGGGAAAACCCTGGGAACTAGTCGTGATCTATTATCCTTAGG24990.1751178489165328No Hit
GTCGTGACTGGGAAAACCCTGGCAAGGTGTCGTGATGTAGCCTTGTTAGG24210.16965198568504436No Hit
GTCGTGACTGGGAAAACCCTGGACTAGGGTCGTGATCGGAGCCCTTTAGG23820.16691905406930013No Hit
GTCGTGACTGGGAAAACCCTGGACCGGCGTCGTGATAAGAATTAGTTAGG23710.166148227203321No Hit
GTCGTGACTGGGAAAACCCTGGGCCTGTGTCGTGATAAATGACTATTAGG22210.15563695175815098No Hit
GTCGTGACTGGGAAAACCCTGGAGCCAAGTCGTGATCTAGAACCCTTAGG22110.1549362000618063No Hit
GTCGTGACTGGGAAAACCCTGGAGAAAAGTCGTGATTCGTAGCACTTAGG21820.15290402014240678No Hit
GTCGTGACTGGGAAAACCCTGGCTATCCGTCGTGATGAGTGTATTTTAGG21680.15192296776752423No Hit
GTCGTGACTGGGAAAACCCTGGAAGTTAGTCGTGATGTTGAAAGCTTAGG21650.15171274225862083No Hit
GTCGTGACTGGGAAAACCCTGGCCGGAGGTCGTGATAGCCGTGATTTAGG21260.1489798106428766No Hit
GTCGTGACTGGGAAAACCCTGGTTCAGTGTCGTGATTCATTACGCTTAGG20450.1433037219024848No Hit
GTCGTGACTGGGAAAACCCTGGCAAGACGTCGTGATAGGAATTCCTTCTG20310.14232266952760225No Hit
GTCGTGACTGGGAAAACCCTGGCTCTTTGTCGTGATGCAACTTTTTTAGG20030.14036056477783718No Hit
GTCGTGACTGGGAAAACCCTGGGTACAAGTCGTGATCAACTAGTGTTAGG19920.13958973791185805No Hit
GTCGTGACTGGGAAAACCCTGGGGACGAGTCGTGATACAGCCAACTTAGG19220.13468447603744538No Hit
GTCGTGACTGGGAAAACCCTGGTCTACGGTCGTGATTGTACCCCCTTAGG18960.13286252162694923No Hit
GTCGTGACTGGGAAAACCCTGGAAGCCAGTCGTGATACACAGATCTTAGG18740.13132086789499095No Hit
GTCGTGACTGGGAAAACCCTGGTGAGAGGTCGTGATTGTTACGGTTTAGG18440.12921861280595695No Hit
GTCGTGACTGGGAAAACCCTGGGCGATGGTCGTGATGCGGATAGCTTAGG18180.1273966583954608No Hit
GTCGTGACTGGGAAAACCCTGGACTCATGTCGTGATAAGAATAGTTTAGG18170.12732658322582635No Hit
GTCGTGACTGGGAAAACCCTGGGCAAATGTCGTGATCTTCCGGGATTAGG18050.12648568119021272No Hit
GTCGTGACTGGGAAAACCCTGGACATATGTCGTGATATGTATGTTTTAGG17960.12585500466350255No Hit
GTCGTGACTGGGAAAACCCTGGAATTCCGTCGTGATAAAATTACTTTAGG17520.12277169719958599No Hit
GTCGTGACTGGGAAAACCCTGGCGTCGTGTCGTGATCAGTTGTGGTTAGG17400.12193079516397239No Hit
GTCGTGACTGGGAAAACCCTGGGTGCAAGTCGTGATGTACCGGCCTTAGG17300.12123004346762774No Hit
GTCGTGACTGGGAAAACCCTGGGCCAACGTCGTGATCAAAACCATTTAGG17280.1210898931283588No Hit
GTCGTGACTGGGAAAACCCTGGACTTCTGTCGTGATGGCTAGAACTTAGG16930.11863726219115245No Hit
GTCGTGACTGGGAAAACCCTGGAGGTTCGTCGTGATGATGGCAACTTAGG16690.11695545811992525No Hit
GTCGTGACTGGGAAAACCCTGGCCCTAGGTCGTGATGGGTTACATTTAGG16470.11541380438796697No Hit
GTCGTGACTGGGAAAACCCTGGTTAATTGTCGTGATAGGGATAGCTTAGG16440.11520357887906357No Hit
GTCGTGACTGGGAAAACCCTGGCCGTGAGTCGTGATACGGGCTCCTTAGG16380.11478312786125677No Hit
GTCGTGACTGGGAAAACCCTGGCCCAGCGTCGTGATATACAGACCTTAGG15800.11071876802245768No Hit
GTCGTGACTGGGAAAACCCTGGGCGTAGGTCGTGATAGTTCCCTCTTAGG15790.11064869285282322No Hit
GTCGTGACTGGGAAAACCCTGGTCCCGCGTCGTGATGGTCGGGGATTAGG15650.10966764047794068No Hit
GTCGTGACTGGGAAAACCCTGGTTCGCCGTCGTGATGAGAACGTGTTAGG15310.10728508471036882No Hit
GTCGTGACTGGGAAAACCCTGGGTACCAGTCGTGATGACTGTTCCTTAGG15100.10581350614804501No Hit
GTCGTGACTGGGAAAACCCTGGGCTAAGGTCGTGATTGACTGTGATTAGG14860.10413170207681781No Hit
GTCGTGACTGGGAAAACCCTGGCGAATCGTCGTGAAGTCGGTATATTAGG14750.10336087521083867No Hit
GTCGTGACTGGGAAAACCCTGGCCATTTGTCGTGATTCTCCATGATTAGG14730.10322072487156973No Hit
GTCGTGACTGGGAAAACCCTGGATCACAGTCGTGATGTTATTCATTTAGG14690.10294042419303187No Hit
GTCGTGACTGGGAAAACCCTGGCTCGCGGTCGTGATGTCGTTGGGTTAGG14660.10273019868412847No Hit
GTCGTGACTGGGAAAACCCTGGGTTGGAGTCGTGGATGAAGCAAATTAGG14630.10251997317522507No Hit
GTCGTGACTGGGAAAACCCTGGTATGATGTCGTGATGTTAACGACTTAGG14610.10237982283595613No Hit
GTCGTGACTGGGAAAACCCTGGCAATATGTCGTGATCTATGTGCATTAGG14360.10062794359509446No Hit
GTCGTGACTGGGAAAACCCTGGCGCCATGTCGTGATGTAGATGAGTTAGG14290.10013741740765318No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)