FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences905796
Sequences flagged as poor quality0
Sequence length248
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGCCGGTAGTCGTGATTCCGATGAGGATCA16780.18525142526573313No Hit
GTCGTGACTGGGAAAACCCTGGTGGTGTGTCGTGATTAAGTCCTCGATCA16190.17873781734518587No Hit
GTCGTGACTGGGAAAACCCTGGAAAGTGGTCGTGATCTGTACCACGATCA15420.17023700700820052No Hit
GTCGTGACTGGGAAAACCCTGGACGCCCGTCGTGATCTATACTGGGATCA15190.16769780392052958No Hit
GTCGTGACTGGGAAAACCCTGGTTGGGAGTCGTGATATTGCGGAGGATCA15150.16725620338354333No Hit
GTCGTGACTGGGAAAACCCTGGGTTATCGTCGTGATTCAAGAGCTGATCA14890.16438579989313265No Hit
GTCGTGACTGGGAAAACCCTGGGAGAAGGTCGTATTGGGTGGCTGGATCA14890.16438579989313265No Hit
GTCGTGACTGGGAAAACCCTGGAATCAGGTCGTGATAAGACTTGCGATCA14270.15754099156984575No Hit
GTCGTGACTGGGAAAACCCTGGCGCGACGTCGTGATCCTAGGAAAGATCA14180.15654739036162668No Hit
GTCGTGACTGGGAAAACCCTGGATGGAGGTCGTGATCAGATTGAAGATCA13730.15157938432053134No Hit
GTCGTGACTGGGAAAACCCTGGGCTAAGGTCGTGATGACACCGTAGATCA13690.15113778378354506No Hit
GTCGTGACTGGGAAAACCCTGGCTCCGCGTCGTGATGATACAACCGATCA13590.15003378244107946No Hit
GTCGTGACTGGGAAAACCCTGGAACCATGTCGTGATGCTACGTAGGATCA13370.14760497948765505No Hit
GTCGTGACTGGGAAAACCCTGGCATCATGTCGTGATAAACAAACGGATCA13300.1468321785479291No Hit
GTCGTGACTGGGAAAACCCTGGAGGGGGGTCGTGATGCACAAGCTGATCA13270.14650097814518942No Hit
GTCGTGACTGGGAAAACCCTGGTTCGCAGTCGTGATATGAGGATGGATCA12620.1393249694191628No Hit
GTCGTGACTGGGAAAACCCTGGATCGTAGTCGTGATCTCCATGAAGATCA12570.13877296874793No Hit
GTCGTGACTGGGAAAACCCTGGAGGACAGTCGTGATCCTTTGGTCGATCA12380.1366753661972453No Hit
GTCGTGACTGGGAAAACCCTGGTGTTCCGTCGTGATGCTGAGGACGATCA12370.13656496606299873No Hit
GTCGTGACTGGGAAAACCCTGGCATAGTGTCGTGATAGTTAAAATGATCA12170.13435696337806746No Hit
GTCGTGACTGGGAAAACCCTGGGGTGTAGTCGTGATTCTTGGGGAGATCA12150.13413616310957435No Hit
GTCGTGACTGGGAAAACCCTGGCCAATAGTCGTGATTGGAGATCCGATCA11860.13093455921642402No Hit
GTCGTGACTGGGAAAACCCTGGGGATATGTCGTGATATATAGGAGGATCA11770.12994095800820493No Hit
GTCGTGACTGGGAAAACCCTGGTGCACAGTCGTGATCCGAGCACCGATCA11710.12927855720272555No Hit
GTCGTGACTGGGAAAACCCTGGCGCGATGTCGTGATTATACATTGGATCA11700.129168157068479No Hit
GTCGTGACTGGGAAAACCCTGGTCGGAAGTCGTGATGAGCCCGACGATCA11620.12828495599450648No Hit
GTCGTGACTGGGAAAACCCTGGTTACTAGTCGTGATTGATATGGGGATCA11240.12408975089313709No Hit
GTCGTGACTGGGAAAACCCTGGCGCCAGGTCGTGATAGTGACGGAGATCA11190.12353775022190427No Hit
GTCGTGACTGGGAAAACCCTGGACTCGGGTCGTGATATACGTGACGATCA11090.12243374887943863No Hit
GTCGTGACTGGGAAAACCCTGGGCGCTTGTCGTGATGGCGGTTCCGATCA11010.12155054780546613No Hit
GTCGTGACTGGGAAAACCCTGGATGTCGGTCGTGATGAATCAGGCGATCA10930.12066734673149362No Hit
GTCGTGACTGGGAAAACCCTGGGCCATCGTCGTGATTTATACGGCGATCA10720.1183489439123158No Hit
GTCGTGACTGGGAAAACCCTGGCCTACAGTCGTGATAGGAATAGCGATCA10670.11779694324108299No Hit
GTCGTGACTGGGAAAACCCTGGCGGCTCGTCGTGATCTGGGTGAAGATCA10520.11614094122738453No Hit
GTCGTGACTGGGAAAACCCTGGCCCACTGTCGTGATCTATATACTGATCA10460.11547854042190514No Hit
GTCGTGACTGGGAAAACCCTGGACTCAGGTCGTGATATGTACTTGGATCA10440.11525774015341203No Hit
GTCGTGACTGGGAAAACCCTGGGGGCGCGTCGTGATCTGCATTATGATCA10350.11426413894519295No Hit
GTCGTGACTGGGAAAACCCTGGATGGCGGTCGTGATGATCATGCCGATCA10290.11360173813971357No Hit
GTCGTGACTGGGAAAACCCTGGCTCAGAGTCGTGATGGGCAGGCTGATCA10260.11327053773697389No Hit
GTCGTGACTGGGAAAACCCTGGTCACGGGTCGTGATTAAGGCTGGGATCA10220.11282893719998764No Hit
GTCGTGACTGGGAAAACCCTGGGAAGAAGTCGTGATTTTTCGGAGGATCA10150.11205613626026169No Hit
GTCGTGACTGGGAAAACCCTGGGTTGGCGTCGTGATGAGAAAGTTGATCA10110.11161453572327545No Hit
GTCGTGACTGGGAAAACCCTGGACCACGGTCTGATCGCAAGAGACGATCA10090.11139373545478232No Hit
GTCGTGACTGGGAAAACCCTGGTATGGCGTCGTGATAGGAACTGCGATCA10080.11128333532053575No Hit
GTCGTGACTGGGAAAACCCTGGAGCCTAGTCGTGATTGAAAAGACGATCA10030.11073133464930293No Hit
GTCGTGACTGGGAAAACCCTGGGCCTTCGTCGTGATTGGCAGGGCGATCA9990.11028973411231668No Hit
GTCGTGACTGGGAAAACCCTGGGCCAAGGTCGTGATCTACTGACCGATCA9930.1096273333068373No Hit
GTCGTGACTGGGAAAACCCTGGGGTCCCGTCGTGATTACAAAGCTGATCA9910.10940653303834418No Hit
GTCGTGACTGGGAAAACCCTGGAGTCCTGTCGTGATGGCTCGGCTGATCA9900.1092961329040976No Hit
GTCGTGACTGGGAAAACCCTGGTTCGACGTCGTGATACCAAGATCGATCA9890.10918573276985105No Hit
GTCGTGACTGGGAAAACCCTGGCTTGGGGTCGTGATGTGAATTCCGATCA9690.10697773008491979No Hit
GTCGTGACTGGGAAAACCCTGGTTTGCCGTCGTGATGCTGAGAGAGATCA9630.1063153292794404No Hit
GTCGTGACTGGGAAAACCCTGGCGGCATGTCGTGATAGCGGTAAGGATCA9620.10620492914519383No Hit
GTCGTGACTGGGAAAACCCTGGGCTGACGTCGTGATACCTCGATCGATCA9620.10620492914519383No Hit
GTCGTGACTGGGAAAACCCTGGTCTACTGTCGTGATGGATCTGCTGATCA9570.10565292847396102No Hit
GTCGTGACTGGGAAAACCCTGGAGTATCGTCGTGATCGATAGGGGGATCA9470.1045489271314954No Hit
GTCGTGACTGGGAAAACCCTGGTACTACGTCGTGATTCACAGGACGATCA9470.1045489271314954No Hit
GTCGTGACTGGGAAAACCCTGGTACAAGGTCGTGATGGATAGGCTGATCA9440.10421772672875569No Hit
GTCGTGACTGGGAAAACCCTGGGCCGGCGTCGTGATAAATGCGCTGATCA9360.1033345256547832No Hit
GTCGTGACTGGGAAAACCCTGGAGGACGGTCGTGATAAACCGTATGATCA9320.10289292511779695No Hit
GTCGTGACTGGGAAAACCCTGGGACCTTGTCGTGATGTAGCGTTCGATCA9290.10256172471505726No Hit
GTCGTGACTGGGAAAACCCTGGTACCTGGTCGTGATAATCAAGGGGATCA9180.10134732323834506No Hit
GTCGTGACTGGGAAAACCCTGGAAATTGGTCGTGATCTGGCCAAAGATCA9180.10134732323834506No Hit
GTCGTGACTGGGAAAACCCTGGAGGCAGGTCGTGATCATAGCTTAGATCA9180.10134732323834506No Hit
GTCGTGACTGGGAAAACCCTGGCCCTCTGTCGTGATAATGTATGTGATCA9140.10090572270135881No Hit
GTCGTGACTGGGAAAACCCTGGTATATAGTCGTGATCTTTATGACGATCA9090.10035372203012599No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)