FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492972

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492972
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences972949
Sequences flagged as poor quality0
Sequence length248
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGGTCTAAGTCGTGATATACATATTTTAGG12670.1302226529859222No Hit
GTCGTGACTGGGAAAACCCTGGGTTCTGGTCGTGATACAAAGTGGTTAGG11580.11901959917734639No Hit
GTCGTGACTGGGAAAACCCTGGCGCCAGGTCGTGATGAGATGGGCTTAGG10560.10853600753996356No Hit
GTCGTGACTGGGAAAACCCTGGATTTGAGTCGTGATACTGAGCTCTTAGG10370.10658318164672557No Hit
GTCGTGACTGGGAAAACCCTGGTAATTTGTCGTGATACCGCACAGTTAGG10040.10319143141110171No Hit
GTCGTGACTGGGAAAACCCTGGCCATAAGTCGTGATAGCGTTGCCTTAGG10030.1030886511009313No Hit
GTCGTGACTGGGAAAACCCTGGCGTGATGTCGTGATACGCACCCGTTAGG10010.10288309048059045No Hit
GTCGTGACTGGGAAAACCCTGGGACCCCGTCGTGATGAGTTGTGATTAGG9800.10072470396701164No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)