FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1201044
Sequences flagged as poor quality0
Sequence length248
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGCAAGGCGTCGTGATCCGTCCCACTGACC20730.17259983814081747No Hit
GTCGTGACTGGGAAAACCCTGGAGGAGTGTCGTGATGACCCGAAATGACC20000.16652179270701156No Hit
GTCGTGACTGGGAAAACCCTGGACAGACGTCGTGATGAGTCGTGCTGACC18050.15028591791807794No Hit
GTCGTGACTGGGAAAACCCTGGTCGAATGTCGTGATCTGCTGAAATGACC17550.14612287310040267No Hit
GTCGTGACTGGGAAAACCCTGGTCGTCTGTCGTGATTCCCCGTCTTGACC16840.14021134945930372No Hit
GTCGTGACTGGGAAAACCCTGGGCCTAAGTCGTGATCCACGTTACTGACC16460.13704743539787054No Hit
GTCGTGACTGGGAAAACCCTGGGCTTCTGTCGTGATGTTATCATGTGACC15210.1266398233536823No Hit
GTCGTGACTGGGAAAACCCTGGGATACCGTCGTGATATCAATTGTTGACC14590.12147764777976494No Hit
GTCGTGACTGGGAAAACCCTGGTGCACGGTCGTGATGAGACCGAGTGACC14380.11972916895634132No Hit
GTCGTGACTGGGAAAACCCTGGCCTCCCGTCGTGATAATAACCAGTGACC13670.11381764531524241No Hit
GTCGTGACTGGGAAAACCCTGGTGGCCCGTCGTGATGCACAGGAATGACC13590.11315155814441435No Hit
GTCGTGACTGGGAAAACCCTGGCCCTGGTCGTGAGCTATCTATCATGACC13310.1108202530465162No Hit
GTCGTGACTGGGAAAACCCTGGCGCTGTGTCGTGATGCATGTGATTGACC13110.10915503511944608No Hit
GTCGTGACTGGGAAAACCCTGGCCGCTCGTCGTGATCCAAAGAGGTGACC12950.10782286077778999No Hit
GTCGTGACTGGGAAAACCCTGGCAGGTAGTCGTGATGGAAACTGATGACC12850.10699025181425492No Hit
GTCGTGACTGGGAAAACCCTGGTGGATCGTCGTGATTAGCACGAGTGACC12840.10690699091790141No Hit
GTCGTGACTGGGAAAACCCTGGGTAATTGTCGTGATGGCCTTTGCTGACC12820.10674046912519443No Hit
GTCGTGACTGGGAAAACCCTGGAGCAGGGTCGTGATGGCAATGTGTGACC12640.10524177299083132No Hit
GTCGTGACTGGGAAAACCCTGGCTGAGCGTCGTGATAAGCCCCTTTGACC12640.10524177299083132No Hit
GTCGTGACTGGGAAAACCCTGGCATGCCGTCGTGATCTTCAATTATGACC12470.1038263377528217No Hit
GTCGTGACTGGGAAAACCCTGGTCGCCTGTCGTGATCAAGTGAAGTGACC12470.1038263377528217No Hit
GTCGTGACTGGGAAAACCCTGGCATATTGTCGTGATAAAAACGAATGACC12370.10299372878928666No Hit
GTCGTGACTGGGAAAACCCTGGCATTCCGTCGTGATCCTGAGGGCTGACC12220.10174481534398407No Hit
GTCGTGACTGGGAAAACCCTGGCAACGTGTCGTGATTTACCGGTATGACC12130.1009954672768025No Hit
GTCGTGACTGGGAAAACCCTGGGGCGCGGTCGTGATAGCTGCCACTGACC12090.1006624236913885No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)