FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145864
Sequences flagged as poor quality0
Sequence length248
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGCGGAGTGTCGTGATCGAAAACACTAGCT7870.5395436845280536No Hit
GTCGTGACTGGGAAAACCCTGGAATCAGGTCGTGATGTACATTTCTAGCT5680.3894038282235507No Hit
GTCGTGACTGGGAAAACCCTGGCAGCTGGTCGTGATATACTTGTTTCTCT4730.3242746668129216No Hit
GTCGTGACTGGGAAAACCCTGGCCCTTCGTCGTGATTTTTATTTATATTT4180.28656831020676793No Hit
GTCGTGACTGGGAAAACCCTGGACCTACGTCGTGATGAGCCAATGTAGCT3660.2509186639609499No Hit
GTCGTGACTGGGAAAACCCTGGAACTCAGTCGTGATCCGCACGCGTAGCT3490.23926397191904786No Hit
GTCGTGACTGGGAAAACCCTGGCACTAGGTCGTGATGACGCATGATAGCT2840.19470191411177534No Hit
GTCGTGACTGGGAAAACCCTGGGCCGTAGTCGTGATCAAAGGCTATATTT2750.18853178303076837No Hit
GTCGTGACTGGGAAAACCCTGGATCTTCGTCGTGATTAATACTCCTAGCT2400.16453682882685242No Hit
GTCGTGACTGGGAAAACCCTGGCAGGATGTCGTGATCATGATGAATAGCT2130.14602643558383152No Hit
GTCGTGACTGGGAAAACCCTGGTCTGCAGTCGTGATGCCAAGGATTAGCT1930.13231503318159382No Hit
GTCGTGACTGGGAAAACCCTGGATCCATGTCGTGATCGCAACCACTAGCT1820.12477376186036308No Hit
GTCGTGACTGGGAAAACCCTGGATGCGGTGTCGTGATTCCACGTCTAGCT1630.11174792957823726No Hit
GTCGTGACTGGGAAAACCCTGGATCGACGTCGTGATCCCACCCCTTAGCT1570.10763450885756594No Hit
GTCGTGACTGGGAAAACCCTGGCTCAAGGTCGTGATTGGGACAGGTAGCT1540.10557779849723029No Hit
GTCGTGACTGGGAAAACCCTGGATAAACGTCGTGATGCTGATCTCTAGCT1530.10489222837711841No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)