FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005492998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005492998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2304881
Sequences flagged as poor quality0
Sequence length248
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGTCGATGGTCGTGATCCGAAGAAAGATCA42490.1843479121047898No Hit
GTCGTGACTGGGAAAACCCTGGTCGTTAGTCGTGATCGGAAATTGGATCA35830.15545271100763988No Hit
GTCGTGACTGGGAAAACCCTGGCTGTCCGTCGTGATGTAGTACTGGATCA33860.14690563200442885No Hit
GTCGTGACTGGGAAAACCCTGGGATAGTGTCGTGATCGCATCACTGATCA31530.13679665023920975No Hit
GTCGTGACTGGGAAAACCCTGGGTAGTTGTCGTGATGCCTATGAGGATCA30620.13284850714635593No Hit
GTCGTGACTGGGAAAACCCTGGCCTGAAGTCGTGATTATCGGAGCGATCA30290.1314167629478485No Hit
GTCGTGACTGGGAAAACCCTGGCCTTGAGTCGTGATCGTAAGAGTGATCA29940.12989824637367395No Hit
GTCGTGACTGGGAAAACCCTGGATCGTCGTCGTGATACGGATCGAGATCA28110.12195857400013276No Hit
GTCGTGACTGGGAAAACCCTGGCATGCAGTCGTGATTTGGAGACTGATCA27400.11887815466395012No Hit
GTCGTGACTGGGAAAACCCTGGGGTACAGTCGTGATGTGGATTATGATCA26310.11414906019009223No Hit
GTCGTGACTGGGAAAACCCTGGATGCAGGTCGTGATAATTGCCAAGATCA26180.11358503974825598No Hit
GTCGTGACTGGGAAAACCCTGGGCCCGTGTCGTGATGCAAAGTGGGATCA25940.11254377124025058No Hit
GTCGTGACTGGGAAAACCCTGGTCACGGGTCGGGATTTAACAAGAGATCA25920.11245699886458346No Hit
GTCGTGACTGGGAAAACCCTGGGACTGAGTCGTGATGGTAGCGGAGATCA25750.11171943367141296No Hit
GTCGTGACTGGGAAAACCCTGGGGGTGAGTCGTGATGGCAAGGAAGATCA25650.1112855717930774No Hit
GTCGTGACTGGGAAAACCCTGGTTCGGGGTCGTGATGCCTGTGAGGATCA25530.11076493753907468No Hit
GTCGTGACTGGGAAAACCCTGGCCTTACGTCGTGATAGCGGTGGAGATCA24420.1059490706895497No Hit
GTCGTGACTGGGAAAACCCTGGAGATCCGTCGTGATCCTAAGATAGATCA24270.10529827787204632No Hit
GTCGTGACTGGGAAAACCCTGGAGGAATGTCGTGATCCACCGAGAGATCA23870.10356283035870399No Hit
GTCGTGACTGGGAAAACCCTGGTCCGAAGTCGTGATGGATAAAGGGATCA23780.10317235466820196No Hit
GTCGTGACTGGGAAAACCCTGGCCTCAGGTCGTGATATGTTCTTGGATCA23710.10286865135336705No Hit
GTCGTGACTGGGAAAACCCTGGCAAATTGTCGTGATAACGATGACGATCA23700.10282526516553349No Hit
GTCGTGACTGGGAAAACCCTGGGAGACTGTCGTGATATGGAAGCTGATCA23570.10226124472369723No Hit
GTCGTGACTGGGAAAACCCTGGCACATGGTCGTGATCGGAGTTAAGATCA23530.102087699972363No Hit
GTCGTGACTGGGAAAACCCTGGATCTTCGTCGTGATAGGTAAACTGATCA23490.10191415522102876No Hit
GTCGTGACTGGGAAAACCCTGGACCTAGGTCGTGATGACACAGGTGATCA23300.10108981765219116No Hit
GTCGTGACTGGGAAAACCCTGGTCTGCCGTCGTGATAAAGATGGGGATCA23280.10100304527652403No Hit
GTCGTGACTGGGAAAACCCTGGGCGTCTGTCGTGATCCGTGAGAGGATCA23050.1000051629563522No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)