FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005493010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1055494
Sequences flagged as poor quality0
Sequence length248
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGTTAAAGGTCGTGATGGCACCTCATTAGG37180.35225212080788715No Hit
GTCGTGACTGGGAAAACCCTGGTCAACTGTCGTGATCAAGGTGATTTAGG18740.1775471959101615No Hit
GTCGTGACTGGGAAAACCCTGGAACTGTGTCGTGATGCAGAGCAATTAGG14630.1386080830397899No Hit
GTCGTGACTGGGAAAACCCTGGCACTATGTCGTGATGCCTTATTATTAGG13400.12695477188880278No Hit
GTCGTGACTGGGAAAACCCTGGAGTCTTGTCGTGATGCACTCCTTTTAGG11820.11198547788997379No Hit
GTCGTGACTGGGAAAACCCTGGAACATCGTCGTGATGCAGTTTATTTAGG10770.1020375293464482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)