FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005493041

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493041
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95558
Sequences flagged as poor quality0
Sequence length248
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGAAATCAGTCGTGATGGCCGTGGGCAGAT2167322.680466313652442No Hit
GTCGTGACTGGGAAAACCCTGGGCTCAAGTCGTGATATAAAGTTCCAGAT1248013.060131019904142No Hit
GTCGTGACTGGGAAAACCCTGGAACAACGTCGTGATGTGGGGACTCAGAT975210.205320329014839No Hit
GTCGTGACTGGGAAAACCCTGGTACTGTGTCGTGATGGTGTGTTCCAGAT55455.8027585340840115No Hit
GTCGTGACTGGGAAAACCCTGGTCGTAGGTCGTGATTACAGAAAACAGAT48935.120450407082609No Hit
GTCGTGACTGGGAAAACCCTGGAATACCGTCGTGATACGATGTTCCAGAT28282.959459176625714No Hit
GTCGTGACTGGGAAAACCCGGGGCTCAAGTCGTGATATAAAGTTCCAGAT11291.1814814039640846No Hit
GTCGTGACTGGGAAAACCCTGGTCCAAGGTCGTGATAGATCTCCTCAGAT8830.9240461290525127No Hit
GTCGTGACTGGGAAAACCCGGGAAATCAGTCGTGATGGCCGTGGGCAGAT8040.8413738253207477No Hit
GTCGTGACTGGGAAAACCCTGGCCCCCCCGCCACGCAGTTTTATCCACGA5460.5713807321208062No Hit
GTCGTGACTGGGAAAACCCTGGCGTACCGTCGTGATTTGTGCTTCCAGAT5010.5242889135394211No Hit
GTGGTGACTGGGAAAACCCTGGAAATCAGTCGTGATGGCCGTGGGCAGAT4020.42068691266037384No Hit
GTCGTGACTGGGAAAACCCGGGTCGTAGGTCGTGATTACAGAAAACAGAT3930.41126854894409676No Hit
GTGGTGACTGGGAAAACCCTGGGCTCAAGTCGTGATATAAAGTTCCAGAT3720.38929236693945035No Hit
GTGGTGACTGGGAAAACCCGGGGCTCAAGTCGTGATATAAAGTTCCAGAT2490.2605747294836644No Hit
GTCGTGACAGGGAAAACCCTGGAAATCAGTCGTGATGGCCGTGGGCAGAT2390.25010988091002323No Hit
GTCGTGACTGGGAACACCCTGGAAATCAGTCGTGATGGCCGTGGGCAGAT2230.2333661231921974No Hit
GTCGTGACTGGGAACACCCTGGGCTCAAGTCGTGATATAAAGTTCCAGAT2010.21034345633018692No Hit
GTCGTGACTGGGAAAACCCTGGGAACATGTCGTGATATCAACCCGCACGA1870.1956926683270893No Hit
GTCGTGACTGGGAAAACCCTGGCGGATGTCGTGAGGACCTGGGCACAGAT1870.1956926683270893No Hit
GTCGTGACTGGGAAAACCCGGGAACAACGTCGTGATGTGGGGACTCAGAT1820.19046024404026873No Hit
GTGGTGACTGGGAAAACCCGGGAAATCAGTCGTGATGGCCGTGGGCAGAT1740.18208836518135582No Hit
GTCGTGACTGGGAAACCCCTGGAAATCAGTCGTGATGGCCGTGGGCAGAT1720.1799953954666276No Hit
GTCGTGACTGGGAAACCCCTGGGCTCAAGTCGTGATATAAAGTTCCAGAT1680.17580945603717116No Hit
GTCGTGACTGGGAAAACCCTGGCGGATGTCCTGAGGACCTGGGCACAGAT1670.17476297117980702No Hit
GTCGTGACAGGGAAAACCCTGGGCTCAAGTCGTGATATAAAGTTCCAGAT1600.16743757717825825No Hit
GTCGTGACTGGGAAAACCCTGGAAATCAGTCGTGATGGCCGAGGGCAGAT1510.1580192134619812No Hit
GTGGTGACTGGGAAAACCCTGGAACAACGTCGTGATGTGGGGACTCAGAT1470.15383327403252475No Hit
GTCGTGACTGGGAACACCCTGGAACAACGTCGTGATGTGGGGACTCAGAT1360.14232194060151948No Hit
GTCGTGACTGGGAAAACCCTGGGCTCAAGTCGTGATATAAAGTACCAGAT1310.13708951631469893No Hit
GTCGTGACTGGGAAAACCCTGGAAAACAGTCGTGATGGCCGTGGGCAGAT1130.11825278888214488No Hit
GTCGTGACTGGGAAAACCCTGGCGTACCGTCGTGATTTGTGCTTACAGAT1040.10883442516586785No Hit
GTCGTGACTGGGAAACCCCTGGAACAACGTCGTGATGTGGGGACTCAGAT980.10255551602168315No Hit
GTCGTGACTGGGAATACCCTGGAAATCAGTCGTGATGGCCGTGGGCAGAT980.10255551602168315No Hit
GTCGTGACAGGGAAAACCCTGGAACAACGTCGTGATGTGGGGACTCAGAT960.10046254630695493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)