FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005493046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences299213
Sequences flagged as poor quality0
Sequence length248
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGTTCAGTGTCGTGATTCAAGGGAACGATG192596.436551887785624No Hit
GTCGTGACTGGGAAAACCCTGGCACACAGTCGTGATGATGAGGAACGATG67092.2422154117635262No Hit
GTCGTGACTGGGAAAACCCTGGGCTAGAGTCGTGATGATGAGGAACGATG42701.4270770320808253No Hit
GTCGTGACTGGGAAAACCCTGGAAGTTCGTCGTGATGAAGATTACCGAAT20580.6878043400520699No Hit
GTCGTGACTGGGAAAACCCGGGTTCAGTGTCGTGATTCAAGGGAACGATG19210.6420175593974861No Hit
GTCGTGACTGGGAAAACCCTGGATTGCTGTCGTGATCTAACATCCCGAAT16510.5517808383994011No Hit
GTCGTGACTGGGAAAACCCTGGACAATCGTCGTGATGATGGAGAGCGATG7010.23428126451725023No Hit
GTCGTGACTGGGAAAACCCTGGCCTCAAGTCGTGACGTCAGTACCTGGTG5180.1731208202852149No Hit
GTCGTGACTGGGAAAACCCTGGGCTAGAGTCGTGGTGATGAGGAACGATG4670.15607610631890995No Hit
GTCGTGACTGGGAAAACCCTGGGAGGGTGTCGTGATATAATGAATCGATG4530.15139716523012034No Hit
GTGGTGACTGGGAAAACCCTGGTTCAGTGTCGTGATTCAAGGGAACGATG4210.1407024427414584No Hit
GTCGTGACTGGGAAAACCCTGGGTCGTTGTCGTGATTAGAAGCCCCGAAT3840.12833666986394307No Hit
GTCGTGACTGGGAAAACCCTGGGCCAAGGTCGTGATAAGTACCCGCGATG3670.12265509854184142No Hit
GTCGTGACTGGGAAAACCCTGACCCTGCCGTACATCGGGGGGGAGCGATG3400.11363142644203295No Hit
GTCGTGACTGGGAAAACCCTGGTAACTCGTCGTGATTGATTTGACCGATG3340.11162616597540882No Hit
GTCGTGACTGGGAAAACCCTGGGCCGGTGTCGTGATAGGGGCCCATGGTG3210.10728143496438992No Hit
GTCGTGACTGGGAAAACCCTGGCTCCAAGTCGTGATATGAAATCGCGATG3030.10126565356451758No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)