FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005493071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1433313
Sequences flagged as poor quality0
Sequence length248
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGGTCAACGTCGTGATAATGCGCTCGATCA350312.444057927333388No Hit
GTCGTGACTGGGAAAACCCTGGCATACAGTCGTGATGGCTAGTGTGATCA63550.44337838280961656No Hit
GTCGTGACTGGGAAACCCCTGGGTCAACGTCGTGATAATGCGCTCGATCA19370.13514145200664474No Hit
GTCGTGACTGGGAAAACCCTGGAGACGTGTCGTGATCTGTATTGGGATCA15150.10569917387200144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)