FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005493080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1600373
Sequences flagged as poor quality0
Sequence length248
%GC56

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTGACTGGGAAAACCCTGGCTCGAGTCCTGATTCGGAAACCGACTTG126250.7888785926780819No Hit
GTCGTGACTGGGAAAACCCTGGCTCGAGTCGTGATTCGGAAACCGACTTG112210.7011490446289709No Hit
GTCGTGACTGGGAAAACCCTGGGCTAGGGTCGTGATATCTGGAGAACTTG63590.3973448689774196No Hit
GTCGTGACTGGGAAAACCCTGGATGCTTGTCGTGATATCTTGGGCACTTG46980.2935565646258716No Hit
GTCGTGACTGGGAAAACCCTGGCGTTCTGTCGTGATGGGTGCGTGACTTG40440.2526910913893199No Hit
GTCGTGACTGGGAAAACCCTGGCTCATAGTCGTGATTGCCAGATGACTTG32080.20045326933158708No Hit
GTCGTGACTGGGAAAACCCTGGACACACGTCGTGATGAAAGCCCCACTTG30990.19364235712549513No Hit
GTCGTGACTGGGAAAACCCTGGACCACTGTCGTGATGACTCAGGCACTTG27620.17258476617638513No Hit
GTCGTGACTGGGAAAACCCTGGCTCTATGTCGTGATTGACACGTCACTTG26270.16414923271012447No Hit
GTCGTGACTGGGAAAACCCTGGTTCCACGTCGTGATCGCGGGATCACTTG26110.16314946578078984No Hit
GTCGTGACTGGGAAAACCCTGGTGTCAGGTCGTGATTTCCTGGGTACTTG23800.14871533073852158No Hit
GTCGTGACTGGGAAAACCCTGGCAAGACGTCGTGATCTCCATACCACTTG23680.14796550554152063No Hit
GTCGTGACTGGGAAAACCCTGGTGCTTAGTCGTGATGTGAAACCTACTTG23490.1467782823129358No Hit
GTCGTGACTGGGAAAACCCTGGAACGGGGTCGTGATGTGTAGGGTACTTG23150.14465377758809977No Hit
GTCGTGACTGGGAAAACCCTGGACCTGGGTCGTGATCTAATACCCACTTG22830.14265424372943059No Hit
GTCGTGACTGGGAAAACCCTGGCCGAAGGTCGTGATTTGGCATGAACTTG22520.1407171953038448No Hit
GTCGTGACTGGGAAAACCCTGGTACTAGGTCGTGATCTCGAGTGGACTTG22510.1406547098707614No Hit
GTCGTGACTGGGAAAACCCTGGCATCAAGTCGTGATTGAGATGGAACTTG21550.13465610829475377No Hit
GTCGTGACTGGGAAAACCCTGGGGAAAAGTCGTGATGAGGTCGGCACTTG21350.13340639963308554No Hit
GTCGTGACTGGGAAAACCCTGGACTAAGGTCGTGAACCCGGCCTCACTTG21220.13259408900300118No Hit
GTCGTGACTGGGAAAACCCTGGGGCAACGTCGTGATCCAAATGCAACTTG21170.1322816618375841No Hit
GTCGTGACTGGGAAAACCCTGGGCTGAAGTCGTGATTTCTTGGATACTTG20910.1306570405774154No Hit
GTCGTGACTGGGAAAACCCTGGGGCTATGTCGTGATGGATGTGCCACTTG20890.13053206971124856No Hit
GTCGTGACTGGGAAAACCCTGGGTTCCCGTCGTGATTTGCGTAGAACTTG20580.12859502128566278No Hit
GTCGTGACTGGGAAAACCCTGGGACTGAGTCGTGATGAACCGCTTACTTG20570.12853253585257937No Hit
GTCGTGACTGGGAAAACCCTGGGTGTTCGTCGTGATACGTTGTCAACTTG19810.12378364293824003No Hit
GTCGTGACTGGGAAAACCCTGGCTACCCGTCGTGATTAAGTAATCACTTG19600.12247144884348837No Hit
GTCGTGACTGGGAAAACCCTGGCTATATGTCGTGATCGGGACGGGACTTG19380.12109676931565329No Hit
GTCGTGACTGGGAAAACCCTGGAGACGTGTCGTGATACGAATTTCACTTG19250.12028445868556893No Hit
GTCGTGACTGGGAAAACCCTGGGCGCTAGTCGTGATAACATCAAGACTTG18810.11753509962989879No Hit
GTCGTGACTGGGAAAACCCTGGCGCCCTGTCGTGATTATAGCGGGACTTG18350.1146607697080618No Hit
GTCGTGACTGGGAAAACCCTGGCACTAGGTCGTGATACAATGGATACTTG18290.11428585710956134No Hit
GTCGTGACTGGGAAAACCCTGGACCACTGTCGTGATAGGCAGTGTACTTG17970.11228632325089213No Hit
GTCGTGACTGGGAAAACCCTGGCCAACTGTCGTGATGAAAGTGCTACTTG17820.11134904175464096No Hit
GTCGTGACTGGGAAAACCCTGGCATCGTGTCGTGATACTGAGGCTACTTG17740.11084915828997366No Hit
GTCGTGACTGGGAAAACCCTGGTAAGTAGTCGTGATACCATCGGAACTTG17610.11003684765988929No Hit
GTCGTGACTGGGAAAACCCTGGGGCTGCGTCGTGATGTAAACTCAACTTG17480.10922453702980493No Hit
GTCGTGACTGGGAAAACCCTGGGAGCCAGTCGTGATGAGTACGATACTTG16960.10597529450946748No Hit
GTCGTGACTGGGAAAACCCTGGCTCGAGTCCTGAATCGGAAACCGACTTG16230.10141385789437837No Hit
GTCGTGACTGGGAAAACCCTGGTGGCCCGTCGTGATTGCGTTAGGACTTG16200.10122640159512815No Hit
GTCGTGACTGGGAAAACCCTGGAACTCTGTCGTGATGGTTGAGGTACTTG16070.10041409096504378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)