FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005493092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57515067
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACCTGG269400.018.3056931
TGAGCCG151450.018.0806031
GCGCGAT138900.018.0149821
ATGCGAT162300.017.7222611
TGAGAGG180650.017.671511
TGCGGGT135950.017.5451831
GGGACCT137000.017.5202181
GCATGCG171250.017.4793361
AGGATGG140950.017.416868
TGGCTGG156200.017.3899171
ACTGAAC169750.017.3627741
ACGAGCC166000.017.3573721
GCGAGGA82400.017.244825
TGACGGC104700.017.241671
CCTTACG192500.017.2227131
GTAACTG197300.017.1686781
TAGCCGG143150.017.1238231
CATGGCG131050.017.1022641
TACGGGC122750.017.0528321
GCGGGTG73950.016.9981082
Produced by FastQC (version 0.11.5)