FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005493101

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493101
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40922358
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGGGT115650.017.7757321
ACGAGGA117950.017.7344361
CGAGCCG96000.017.7239022
TAGCCGG161650.017.6619871
ACGAGCC136200.017.6056581
GGGAATG103400.017.5887371
TGACGGC92650.017.5672361
GCCGGAG60150.017.5278683
GCGCGAT69700.017.4957371
GTAACGG151950.017.48372710
CCGGAGG50150.017.4126244
ACTGATG125300.017.4047071
TGGCTGG102000.017.3986171
CGCGAAA130200.017.17133110
TACGGTG123350.017.1592184
ATGCGAT99400.017.0888421
CAATGGA144850.016.918748
CCGGGAT71200.016.9163931
GGGACCT78250.016.8752771
CGGACGT108700.016.7955671
Produced by FastQC (version 0.11.5)