FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005493102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41820036
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGGGT116450.018.2107561
ACGAGGA125500.017.9018381
CGAGCCG99900.017.7111032
TGACGGC93000.017.6935351
ACGAGCC142800.017.6664181
GCCGGAG59350.017.644333
TAGCCGG163600.017.529761
GGGAATG107950.017.5041471
ACTGATG130900.017.4384381
GTAACGG157200.017.37787410
CCGGAGG50400.017.3642754
TACGGTG124350.017.2608854
GCGCGAT68750.017.227041
TGGCTGG109750.017.1806051
CGCGAAA134400.017.17137310
GGGACCT77950.017.0417271
ATGCGAT100500.016.9504091
GACCTGG91950.016.9056131
CAATGGA153200.016.8264398
CGTGAGA70650.016.7857610
Produced by FastQC (version 0.11.5)