FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005493142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41820036
Sequences flagged as poor quality0
Sequence length10
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTACCATTT4114372898.38281344377609No Hit
TCTACCATTA4597631.0993845151161514No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)