FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005493211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41423821
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAGGA123250.018.0034071
ACGAGCC138150.017.8213581
TGCGGGT113450.017.7684941
GGGAATG103000.017.7257961
TGACGGC95150.017.62161
TAGCCGG166750.017.60251
CGAGCCG97650.017.5627772
GCCGGAG61500.017.560523
GTAACGG147850.017.53080610
GCGCGAT70250.017.373751
ACTGATG127500.017.301291
CCGGAGG52900.017.2962954
TGGCTGG104850.017.2889981
TACGGTG120500.017.1613394
CAATGGA148750.017.142378
ATGCGAT100400.017.138581
CCGGGAT71550.017.0860481
CGCGAAA132400.017.03125810
GGGACCT76450.016.9985451
CGGACGT112050.016.8476811
Produced by FastQC (version 0.11.5)