FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005493212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005493212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41800141
Sequences flagged as poor quality0
Sequence length26
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAGGA124900.018.1664371
TGCGGGT115100.017.8531271
CGAGCCG94700.017.7081952
TAGCCGG167800.017.611961
ACGAGCC133700.017.606771
CCGGAGG49450.017.5928154
GGGAATG103700.017.5872151
TGACGGC91600.017.5731561
GCCGGAG59850.017.5264193
ACTGATG127450.017.4183351
GCGCGAT68150.017.3810121
GTAACGG156800.017.27655810
ATGCGAT104100.017.2409381
TGGCTGG108900.017.2251341
TACGGTG126600.017.1320064
CAATGGA148300.017.0865158
CGCGAAA134600.017.0057210
GACCTGG96200.016.8784521
CTGAAAC124250.016.7235811
CGTGAGA73300.016.71192410
Produced by FastQC (version 0.11.5)