FastQCFastQC Report
Thu 12 May 2022
EGAF00005497477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005497477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42315620
Sequences flagged as poor quality0
Sequence length35-101
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGAGCCCGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGC590350.13951113087791223No Hit
GGGGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGAG499940.11814549804540261No Hit
GGGGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGAGGGCGAGGCCC427400.10100289207625932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)