FastQCFastQC Report
Wed 11 May 2022
EGAF00005497560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005497560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39087563
Sequences flagged as poor quality0
Sequence length35-101
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG1041430.2664351318090616No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA534460.13673402969635123No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG413100.10568579064394472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)