FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005497568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005497568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59153649
Sequences flagged as poor quality0
Sequence length35-101
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG969450.16388676208292746No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCA887040.14995524620974776No Hit
CCTTGGTCCGTGTTACAAGACGGGTCGGGTGGGTAGCCGACGTCGCCGCC770240.13021005686394765No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN769300.13005114866202083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)