FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005497580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005497580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60166510
Sequences flagged as poor quality0
Sequence length101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG1401870.23299839063292854No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA699420.11624739410678799No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)