FastQCFastQC Report
Thu 12 May 2022
EGAF00005497684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005497684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43230148
Sequences flagged as poor quality0
Sequence length35-101
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG1316490.3045305327198972No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA627240.14509318820745187No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG524380.12129960785699832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)