FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005498894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005498894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences532104709
Sequences flagged as poor quality0
Sequence length35-150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN160094113.008695606187541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)