FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9529465
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGGCG10453.646961E-57.29984470
GGTCGCC15254.1050953E-76.78868470
CTCGAAA10355.6913254E-55.67683271
CGCCACG12700.00301320225.577524770
CGGGTCG12104.7621797E-55.413082668
GGGTCGC14655.0831542E-55.108179669
Produced by FastQC (version 0.11.5)