FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7469800
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGGCG9403.04517E-87.374681526
CGTTACT11551.6977174E-76.343624657
CCGTTAC12501.1625525E-76.138146456
CGCCGTT11601.2537057E-66.008540654
ATTCGGC11154.479163E-65.9062825
TCGGCGC13203.789737E-75.7769527
GATTCGG12609.78247E-75.776640424
GCCGTTA12404.065225E-65.623050755
TCGCCGT13202.1023898E-65.542341753
GGATTCG14301.7686416E-65.33221223
Produced by FastQC (version 0.11.5)