FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6917266
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCCGAT3208.90934E-49.7352097
GATCGCG6900.00208456637.750506470
TTCGGCG8107.044566E-56.41089526
TCCCACG15400.00118004235.208944370
Produced by FastQC (version 0.11.5)