FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7693614
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGTCCG2950.00480640039.429193546
TTCGGCG5500.00203592126.92957126
CGCCGTT6400.0092801765.99238454
ATTCGGC7250.00561497975.734743625
TCGCCGT7550.008235065.5393253
Produced by FastQC (version 0.11.5)