FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6732142
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGGCGA8003.6046427E-46.12470760
AACGGCG7550.00120609826.0225459
CCGACGG8559.64104E-45.671422
TAACGGC8659.94101E-45.657758758
CGACGGA7550.0088182595.50496443
AGTAACG9200.00219503375.31386656
CGAGTGA10805.132735E-45.19566264
GCGGGGG38851.0913936E-115.142145670
GTAACGG8900.0085620975.103266257
Produced by FastQC (version 0.11.5)