FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9482497
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACCGA1250.001929185516.5764228
ACGTTGT9457.2682544E-46.87852270
AACGGCG11207.1808207E-46.287398370
ACGGAGT15952.7178272E-45.43381770
TCAGCCG15107.64643E-45.38096370
CGGGTCG12653.1815143E-55.254988755
TCGATCT11552.9917268E-45.08338644
CTCGATC12955.8046768E-55.06722353
Produced by FastQC (version 0.11.5)