FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6622257
Sequences flagged as poor quality0
Sequence length35-76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACGAC3100.00738321068.94954818
CGCGCGG7550.0054447297.025023570
AGGCGCG9500.0071966996.141349370
GGTCCCG13001.3348587E-46.11987670
Produced by FastQC (version 0.11.5)