FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005560859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005560859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27163198
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCG8351.851023E-47.74861270
GGCGTCG12000.00174039165.84105470
TAGTCGA7200.0048733725.80859160
CGAGCCG11800.0092144675.483127670
CCGCGGG32301.4370016E-95.17473770
TCGGACC15650.00131225925.16780470
Produced by FastQC (version 0.11.5)